KEGG   Plasmodium falciparum Dd2: PFDG_02161
Entry
PFDG_02161        CDS       T01051                                 
Name
(Broad) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pfd  Plasmodium falciparum Dd2
Pathway
pfd03020  RNA polymerase
pfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFDG_02161
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFDG_02161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfd03021]
    PFDG_02161
   03400 DNA repair and recombination proteins [BR:pfd03400]
    PFDG_02161
Transcription machinery [BR:pfd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PFDG_02161
DNA repair and recombination proteins [BR:pfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFDG_02161
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac Urocanase
AA seq 335 aa
MTTYNDNTNKHQINITKLTKDELDFTLYNSNSGIANALRRIMLSEIPTLAIDVVNVYENT
SAFHDEFIAHRLGLIPIDSRNVNNYEFREKCKCKETCSKCTIQYIIEVKCNHSNKIDVSH
YDIESLEHEPNVPMPIPHGNKNSVSENAIPIVTLSKNQTLHMKLIATKGIGKMHAKWIPA
NVSYRIDHKVLIKHNLIDKLSNEHKLLLANNLNKDCYILNKDTHDDDNNNNNNIQLKLKE
NMSVVMAESSIDLLSELGYKDIIKIVYDETMFHFHVESVGSIPPEQIVQMAIDILENKLK
VLEPQIKSSFYSIDEVAKQLKEQGVSLYGIQLDLE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgactacttataatgataatacaaacaaacatcaaataaatatcacgaaattaactaag
gatgagttggattttacattatataatagtaactctggaatagctaatgcattaagaaga
ataatgttatcagaaattccaacattagctatagatgtagtaaatgtatatgaaaataca
agtgcctttcatgatgaatttattgctcatagattaggtttaataccaatagatagtcgt
aatgtaaataattatgaatttcgtgaaaaatgtaaatgtaaagaaacatgttcaaaatgt
actattcaatatattattgaagtaaaatgtaatcattctaataaaattgatgtatcacat
tatgatattgaatcattagaacatgagcctaatgtacccatgcccataccacatgggaat
aaaaactctgtaagtgaaaatgccatacctattgttactttatcaaaaaaccaaacatta
catatgaaacttatagctacaaaaggtataggtaaaatgcatgcaaaatggattccagct
aatgtatcttatcgtatagatcataaagttcttattaaacataatttaatagataaatta
tcaaatgaacataaactattattagctaataatctaaataaggattgctatatattaaat
aaagatacacatgatgatgataataataataataataatatacaattaaaattaaaagaa
aatatgtctgttgttatggcagaaagttcaattgatcttttatctgaattaggatacaaa
gatattataaaaattgtttatgatgaaaccatgtttcattttcatgttgaatctgttgga
tccattcctcctgaacaaattgtacaaatggcaattgatatattagaaaataaattaaag
gttctagaaccccaaattaaatcatctttctattctatagatgaggtagcaaaacaatta
aaagaacaaggagtttccttatacggtatacaactagacttggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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