KEGG T01051: PFDG

Plasmodium falciparum Dd2: PFDG_03980

Entry

PFDG_03980        CDS       T01051

Name

(Broad) conserved hypothetical protein

K14530

ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]

Organism

pfd Plasmodium falciparum Dd2

Pathway

pfd03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:pfd00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PFDG_03980
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfd03009]
    PFDG_03980
   03016 Transfer RNA biogenesis [BR:pfd03016]
    PFDG_03980
   03029 Mitochondrial biogenesis [BR:pfd03029]
    PFDG_03980
Enzymes [BR:pfd01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     PFDG_03980
Ribosome biogenesis [BR:pfd03009]
Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     PFDG_03980
Transfer RNA biogenesis [BR:pfd03016]
Eukaryotic type
  5'processing factors
   Ribonucrease P
    PFDG_03980
Mitochondrial biogenesis [BR:pfd03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    PFDG_03980

SSDB

Motif

Pfam:

DUF3525 SR-25

AA seq 671 aa
MVSYNCKYDNKIYINNNILYLCINDLTKLRLINHKNVYKDKYMLNHIVSIDICNDKENKD
AITYKKINHTNKCVNKNITNECININLINKTSIQNENHGNSNNKEKIGGKLREIYENFFT
NLYTYPVDLLCIYNNCDENFIRILKSILVNNKSINVQIYPLYIKYHEYSYKLCGALFSKF
SKDSEKEEGKIVTHFIYNMSVDAKNNTTINNNYNNYNNNNNYNNYNNYNNYNNYNNNNNN
GPYSFMKSQYNNIMPNEINMNQVADIYNDIFSNSSINQHNNNEIIQKCYNVKDNYTNQCL
NKFNHELNENHNIYSSRFYNDKNVNNPYVYISKNEMDDKFFYELNMEYIEKEILEKYSCD
DHKIKKNENINIKINNNHDVSSFLCNSKNHTNVINLHDIYNNNPNNNNDDKIKKKKKKIH
KFNDKKFYVNYNSSSSSDISISLTQNGDYKIINSPKEKKKKKNLKNDHISNEKKKKDEYE
YETYKNKKVESVLKFLQNYKNSYYINNQHLLKKECLHDIIDNMKNMKDFYIKQDNSDNED
AKYNNFILYFMEYIGRILLDIKLCCKQNSNMLVKKKKKFYQIQKIIFNNGLIDMKNVHNL
SNFLIHTLINKENNNDSKLHYVLTIYGQDNNFINYDRYLQEVSNQTCIHICFFSSKGDVY
IMILDTQNRIL

NT seq 2016 nt +upstreamnt +downstreamnt
atggtatcttataattgtaaatatgataataaaatatatataaataataatatcctctat
ttatgtattaacgatttaacaaaattaagattaattaatcacaaaaatgtatacaaagac
aaatatatgctgaatcatatagtatcgatagatatatgtaatgataaagaaaataaggat
gccataacgtataaaaaaataaatcatacaaataaatgcgttaataaaaatattacaaat
gaatgtatcaatataaatttaataaataaaacatccatacaaaatgaaaatcacggtaat
agtaataataaagaaaaaattggagggaaattaagagaaatttatgaaaatttttttacg
aatttgtatacatatccagtagatttattatgtatatacaataattgcgatgaaaatttt
attaggatattaaaaagtatactagtcaataataaatccataaatgttcaaatatatcca
ctatatataaaatatcatgaatattcatataaattatgtggggctctattttcaaaattt
tcaaaagattcagaaaaagaagagggaaaaatagttacacattttatttacaacatgtcg
gttgatgcaaaaaataatactactattaataataattacaataattacaataataataat
aattacaataattacaataattacaataattacaataattacaataataataataataat
ggtccatattcttttatgaaaagtcaatataataatataatgccaaatgaaataaatatg
aaccaagttgctgatatatataatgatattttttctaactcttctataaatcaacacaat
aataatgaaattatacaaaaatgttataacgtaaaagataattatacgaatcaatgttta
aataaatttaatcacgaattaaatgaaaatcataatatatattcatctcgtttttacaat
gataaaaatgttaataacccttatgtatatataagtaaaaatgagatggacgataaattt
ttttatgaactgaatatggaatatatagaaaaggagattcttgaaaaatattcttgtgat
gatcataaaataaagaaaaatgaaaatataaatattaaaataaataataatcatgatgta
tcatcatttttatgtaactctaaaaatcatacaaatgtcataaacctacatgatatatac
aataataatcctaataataataatgatgataaaataaaaaaaaaaaaaaaaaaaatacac
aaatttaatgataaaaaattttacgttaattataattcatcttcaagtagtgatataagt
atatcattaactcaaaatggagattataaaattattaattcaccaaaggaaaaaaaaaaa
aaaaaaaacttaaaaaatgatcatatttcaaatgaaaaaaaaaagaaagacgaatatgaa
tatgaaacatataaaaataaaaaagttgaaagtgttcttaaattcttacaaaattataaa
aactcgtactatataaataatcagcatttattaaaaaaagaatgtctccatgatattata
gataatatgaaaaatatgaaagatttttacattaaacaagataattctgataacgaagat
gccaaatataataattttattctttattttatggaatatataggtagaattcttttagat
attaaattatgttgtaaacaaaattcaaatatgttagttaaaaaaaaaaaaaaattttat
caaatccaaaaaattatttttaataatggtctcatagatatgaaaaatgttcataattta
agtaattttttaattcatacattaattaataaagaaaacaataatgatagtaaattacat
tatgttttaactatatatggacaggataataattttattaattatgatagatacttacaa
gaagtatctaatcaaacgtgcattcacatttgtttcttttcttctaagggggatgtttat
ataatgattttagatacacaaaataggatattataa

All links

Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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