KEGG   Pseudomonas fluorescens F113: PSF113_2417
Entry
PSF113_2417       CDS       T01734                                 

Gene name
impB
Definition
(GenBank) ImpB
  KO
K11901  type VI secretion system protein ImpB
Organism
pfe  Pseudomonas fluorescens F113
Pathway
pfe02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSF113_2417 (impB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfe02044]
    PSF113_2417 (impB)
Secretion system [BR:pfe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSF113_2417 (impB)
SSDB
Motif
Pfam: T6SS_VipA
Other DBs
NCBI-ProteinID: AEV62426
UniProt: G8QBH9
Position
complement(2818392..2818952)
AA seq 186 aa
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLEPLPKLNERRF
TEIDRDNFNEVLASISPRATLQVNNTLSGDDSKLNIELNFHHIDDFDPVKVVEQVTPLRR
LFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKSARPQDVPPELPAVAANDDPA
PAEPQA
NT seq 561 nt   +upstreamnt  +downstreamnt
atggcagaaagtacccagcacaagctcgacagagtccgtcctccccgcgtccagatcacc
tatgacgtggaaatcggcaacgccatcgagaaaaaagaattgccactggtggtcggcatt
ctggccgacctctcaggcaagccactggagccgctgcccaagctcaacgagcggcgcttc
acggaaatcgatcgggataatttcaacgaggtactcgcgtccatctccccccgcgccacg
ctccaggtgaacaacaccctcagcggcgacgacagcaagctcaacatcgaactcaacttc
catcacatcgacgacttcgacccggtcaaggtcgtggagcaggtcacgccgctgcgccgg
ttgttcgaagcgcgccaacgcctgcgggacctgttgaccaaactcgatggcaacgacgac
ctggacaagctgctgcgcgacgtgatcgccaacaccgaaggccttcaggaaatcaagtcg
gcgcgcccccaggacgtaccgccagagctgcccgccgtggccgccaacgatgaccctgcc
ccggccgaaccacaggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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