KEGG   Pseudomonas ogarae: PSF113_4547
Entry
PSF113_4547       CDS       T01734                                 
Symbol
groEL
Name
(GenBank) GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pfe  Pseudomonas ogarae
Pathway
pfe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PSF113_4547 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfe03019]
    PSF113_4547 (groEL)
   03110 Chaperones and folding catalysts [BR:pfe03110]
    PSF113_4547 (groEL)
   03029 Mitochondrial biogenesis [BR:pfe03029]
    PSF113_4547 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfe04147]
    PSF113_4547 (groEL)
Enzymes [BR:pfe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     PSF113_4547 (groEL)
Messenger RNA biogenesis [BR:pfe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PSF113_4547 (groEL)
Chaperones and folding catalysts [BR:pfe03110]
 Heat shock proteins
  HSP60 / Chaperonin
   PSF113_4547 (groEL)
Mitochondrial biogenesis [BR:pfe03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    PSF113_4547 (groEL)
Exosome [BR:pfe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PSF113_4547 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   PSF113_4547 (groEL)
  Exosomal proteins of breast cancer cells
   PSF113_4547 (groEL)
  Exosomal proteins of colorectal cancer cells
   PSF113_4547 (groEL)
  Exosomal proteins of bladder cancer cells
   PSF113_4547 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEV64537
Position
complement(5302219..5303862)
AA seq 547 aa
MAAKEVKFGDSARKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKALSKPCADTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVILSKENTTVIDGAGVETDIQARVLQIRQQVADTSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAISELKGDNDDQNVGIQLLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIKEDAPAGGGMPDMGGM
GGMGGMM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcgccggtgtc
aacgtcctggctgacgcagtaaaagcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtagccaaagaaatc
gagctgaaagaccgcttcgaaaacatgggcgcgcaactggtcaaagacgttgcctcccgt
gccaacgatgacgccggcgatggcaccaccaccgctaccgtcctggctcaatcgatcgtc
aacgaaggcctcaaagccgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcgaccatcgccattgtcaaagagctcaaagccctgtccaagccatgcgctgac
accaaggcaatcgctcaggtcggcaccatctccgccaactccgacaactccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgtggctacctg
tccccgtacttcgtcaacaagccggaaaccatgactgccgagctggacggtccgctgatc
ctgctggtcgacaagaagatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagccggccgcccattgctgatcgtggctgaagacgttgaaggcgaagccctggcg
accctggtcgtgaacaacatgcgtggcatcgttaaagtcgcagccgtcaaggctccaggc
tttggcgatcgtcgcaaggccatgctgcaggacatcgccgtactgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcaccaccctggagcacctgggtaacgcc
aagcgcgtgatcctgtccaaggaaaacaccaccgtgatcgacggtgccggcgttgagact
gacatccaggctcgcgttctgcagatccgtcagcaagtggccgacacttcgtccgactac
gaccgtgaaaaactgcaagagcgcctggccaaactgtccggcggcgttgcagtgatcaag
gttggcgctggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcgacccgcgcagccgtcgaagaaggcgtggtacctggcggcggcgtggcactggtt
cgcgctctgcaggctatctccgagctcaaaggcgacaacgatgaccagaacgtgggcatc
cagttgctgcgtcgcgctgtagaagcaccgctgcgccagatcgttgccaactccggcgac
gagccaagcgttgtggtcgataaggtcaagcagggttcgggtaactacggttacaacgct
gctaccggcgaatacggcgacatgatcgaaatgggtatcctggacccggccaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccaccgaggcgatg
atcgctgaaatcaaggaagacgctccagctggcggcggtatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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