KEGG   Pseudomonas ogarae: PSF113_5117
Entry
PSF113_5117       CDS       T01734                                 
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pfe  Pseudomonas ogarae
Pathway
pfe03030  DNA replication
pfe03430  Mismatch repair
pfe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSF113_5117
   03430 Mismatch repair
    PSF113_5117
   03440 Homologous recombination
    PSF113_5117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfe03032]
    PSF113_5117
   03400 DNA repair and recombination proteins [BR:pfe03400]
    PSF113_5117
Enzymes [BR:pfe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSF113_5117
DNA replication proteins [BR:pfe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSF113_5117
DNA repair and recombination proteins [BR:pfe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSF113_5117
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AEV65096
Position
complement(5930581..5931192)
AA seq 203 aa
MERIAVIDFETTGITPSSSCRATEIAVVMLEQGRIVDRYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPSAEKVMNEVNEFVGITPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLNTFAGLPHTGQAHRAMADAEMAANLTAHLASQLRQKHGLRELSHD
LLCSLQKVPAAKINEHLKRHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgcatcgcagtcatcgactttgaaaccaccgggatcaccccgagcagcagttgc
cgggccactgaaatcgcggtggtgatgctcgaacaaggccggatcgtcgaccgctaccag
agcctgatgaatgccggtgtacgggtgccggccttcatcgaacaactgaccggtatcagc
aacgccatgctgcgcagcgccccgtcggcggaaaaagtgatgaacgaggtcaacgagttc
gtcggcatcacgcccctgctggcgcacaacgccgcgttcgaccagaagttctgggacttc
gaactggggcgaatcaagcgtactcgcttgcagaattttgcctgttcactgttgctggcc
cggcgcctgatgccagctgcaccgaaccacaagctcggcacgctcaacacgtttgctggc
ttgccccacaccggccaggctcaccgggccatggccgacgccgaaatggccgccaacctc
accgcgcacctggcttcgcagctgcgacaaaagcatgggctgcgggagttgtcccatgat
ttgctgtgcagtttgcagaaggtgccggcggcgaagatcaatgagcacctcaagcggcat
cgcgggttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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