KEGG   Pseudomonas ogarae: PSF113_5717
Entry
PSF113_5717       CDS       T01734                                 
Symbol
lysA
Name
(GenBank) LysA
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pfe  Pseudomonas ogarae
Pathway
pfe00300  Lysine biosynthesis
pfe00470  D-Amino acid metabolism
pfe01100  Metabolic pathways
pfe01110  Biosynthesis of secondary metabolites
pfe01120  Microbial metabolism in diverse environments
pfe01230  Biosynthesis of amino acids
Module
pfe_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSF113_5717 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSF113_5717 (lysA)
Enzymes [BR:pfe01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PSF113_5717 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AEV65689
Position
6589575..6590822
AA seq 415 aa
MDAFNYRGGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSSGELERVLAAGGSADKIVFSGVGKTREDMRRALEVGVH
CFNIESTDELERLQIVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGV
GVRYRDEEPPLVADYIKAVRERLDGRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDTAARSYDIVGPICETGDFLAKGRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRCAEVLVDGDQAFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgtggcggggagctgttcgcggaaggggttgccctgtccgcg
atcgccgaacgtttcggcacgccgacctatgtctactcccgagcccacatcgaagcccag
taccgcacgttcgccgatgccctcgagggcatgccgcacctggtatgtttcgctgtaaaa
gccaactccaacctgggcgtgctcaatgtcctggcgcgcctgggcgccggtttcgacatc
gtctccagtggcgagctcgaacgtgtgctggccgctggcggcagcgccgacaagatcgtg
ttctccggcgtcggcaagacccgtgaagacatgcgccgcgccctggaagttggcgtgcac
tgcttcaacattgagtccaccgacgagctggagcgcctgcaaatcgtcgccgccgagctg
ggcgtccgcgcgccggtctcgctgcgcgtgaacccggacgtcgacgctggcacccacccg
tacatttccaccggtctcaaggaaaacaagttcggcatcgccattgccgacgccgaagat
gtgtacgtgcgcgccgcccaattgccgaacctggaagtgctgggcgtcgattgccacatc
ggctcgcaactgaccaccctggagccgttcatcgatgccctcgaccgcctgctggcgctg
gtcgaccgcctcggcgactgtggcatctacctgcgccacatcgacctcggtggcggtgtc
ggcgtgcgctatcgcgatgaagagccgccactggtggccgactacatcaaggccgtgcgt
gagcgcctcgacgggcgtgacctggcgctgatgttcgaaccgggccgctacatcgtcgcc
aacgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcagcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gacgtcaccgccgtgcgccctcgcgataccgctgcgcgcagctacgacatcgtcgggccg
atctgcgaaaccggtgatttcctggccaagggtcgggagctggcgctggaagaaggtgat
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcggccgctgcgccgaggtgctggtggacggtgatcaggcattcgaagtgcgtcgccgc
gagacggtagccgagttgtttgccggcgaaagcctgctgccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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