KEGG   Pseudomonas ogarae: PSF113_5799
Entry
PSF113_5799       CDS       T01734                                 
Symbol
impC2
Name
(GenBank) ImpC
  KO
K11900  type VI secretion system protein ImpC
Organism
pfe  Pseudomonas ogarae
Pathway
pfe02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSF113_5799 (impC2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfe02044]
    PSF113_5799 (impC2)
Secretion system [BR:pfe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSF113_5799 (impC2)
SSDB
Motif
Pfam: VipB VipB_2 BMFP TssC
Other DBs
NCBI-ProteinID: AEV65773
Position
6682674..6684176
AA seq 500 aa
MIMTDNTAREGVQNLGATQETSEFASLLLQEFKPKTERAREAVETAVRTLAEQALAQTDL
VSNDAIKSIESIIAAIDAKLTAQVNQVIHHPDFQQLESAWRGLHYLVNNTESDEQLKIRV
LNVSKTDLHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVEL
LGELSKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSR
YIGLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHFG
WCSRIRGVESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKN
TDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEK
DEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQ
LEGLTVSLRLVSKLPSAKGA
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgatcatgactgacaataccgctcgcgaaggcgtgcaaaacctgggtgctacccaagaa
accagcgagttcgcgtccctgctgctgcaagaattcaaacccaagaccgagcgcgcccgc
gaagccgtcgaaacggccgtacgcaccctggccgaacaggccctggcgcagaccgacctg
gtgtccaacgacgccatcaagtcgatcgaatcgatcatcgccgccatcgacgccaagctc
accgcccaggtcaaccaggtcatccaccaccctgacttccagcaactggaaagcgcctgg
cgtggcctgcactatctggtcaacaacaccgagtccgatgagcagctcaagatccgtgtg
ctcaacgtctccaagaccgacctgcacaagaccctgaagaaattcaagggcaccgcgtgg
gaccagagcccgatcttcaagaagatgtacgaagaagaatacggccagttcggcggcgag
ccttacggctgcctggttggcgactactacttcgaccagtcgccaccggatgtcgagctg
ctgggcgaactgtcgaaagtctgcgcggccatgcactccccgttcatcgctgcggcatcg
ccgaccgtgatgggcatgggctcgtggcaggaactgtcgaacccgcgcgacctgaccaag
atcttcaccaccccggaatacgccggctggcgttcgttgcgtgaatcggaagactcgcgc
tacatcggcctgaccatgccacgcttcctggcgcgcctgccgtacggcgccaagaccgac
ccggtggaagccttcgccttcgaagaaaacaccgacggcgccgacagctccaagtacacc
tgggccaacgccgcttacgcgatggcggtgaacatcaaccgttcgttcaaacacttcggt
tggtgctcgcgcatccgtggcgtggagtccggcggtgaagtggaaaacctgccagcccac
accttcccgaccgacgacggtggcgtggacatgaagtgcccgaccgaaatcgccatctcg
gaccgccgtgaagcggaactggcgaagaacggtttcatgccgctgctgcacaagaaaaac
accgacttcgccgcgttcatcggcgcccagtcgttgcagaaaccggccgaatacgacgac
ccggacgccaccgccaacgccaacctggccgcgcgcctgccgtacctgttcgccacttgc
cgtttcgcccattacctcaagtgcatcgtgcgcgacaagatcggttccttcaaagagaag
gacgagatgcagcgctggttgcaggactggatcctcaactacgtcgacggtgacccggcg
cactccaccgagaccaccaaggcccagcacccgttggctgcagccgaagtgatcgtcgaa
gaagtcgaaggcaacccggggtactacaactccaagttctacctgcgcccgcactaccag
ctcgaagggctgaccgtgtcgctgcgcctggtatcgaaactgccgtcggccaagggcgcg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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