KEGG   Pseudomonas simiae PICF7: PFLUOLIPICF708865
Entry
PFLUOLIPICF708865 CDS       T03767                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
pff  Pseudomonas simiae PICF7
Pathway
pff02025  Biofilm formation - Pseudomonas aeruginosa
pff03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pff00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PFLUOLIPICF708865
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PFLUOLIPICF708865
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pff02044]
    PFLUOLIPICF708865
Secretion system [BR:pff02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PFLUOLIPICF708865
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: AJZ93643
Position
1952941..1956441
AA seq 1166 aa
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLVPEGRRWALIILVFAVWIAYRVFRI
IQARRQAAEVMRSLAAETPADPNSVATAEELTTLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKNTDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVSSLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDILAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADSEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALAGHLQSLFERHPPTARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRLNEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGQEQPAANAPAAADDPV
TAHFAELNSIVSKNEGEPAAIDGLLTDMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRAGGTQPIVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq 3501 nt   +upstreamnt  +downstreamnt
gtgaaggcgtttttcagtttcatgattcgctgggtgatccccgtgctgggcttgatcgcg
ctgagcctgatcatctggtttgtggggccgttgctcgacgtgctggtgccggaagggcgc
cgctgggcgctgattatcctggtgttcgcggtgtggatcgcctaccgcgtgtttcgcatc
atccaggcgcggcgccaagcggccgaagtgatgcgcagcctggcggcagaaaccccggcc
gaccccaacagcgttgctactgccgaagagctcaccaccctgcgtcagcgcatggacgag
gccctggcgctgctgaaaaaggccaagttgggcggcgacgaacgccgcaacctctacgag
ctgccgtggtacgtgattatcggccctccgggttcgggcaagaccactgcgttggtcaac
tccggcttgcacttcccgttggctgcccagttgggcgccggtgccgtgcgcggcgtcggc
ggtacgcgcaactgcgactggtggtttaccgatcaagcggtgttgctcgacaccgccggc
cgctacaccacccaggacagcaactccacggtggacaaagccgcgtggctgggctttctc
gacctgctgaaaaagcagcgctcgcgccgccccatcgatggtgccttcattgccatcagc
ctgtcggacctgttgctcggcaccgacgccgagcgcgccgcccatgccgccgctatccgt
ctgcgtatccaggagctgtacacccagctgggtgtgcgtttcccgatctacctgatgctc
accaaactcgacctggtgccagggttcatggagttcttcgacaacctgagcaaggaagag
cgcgcccaggtgtggggcatgacctttgccctggacgacggcaaaaacactgacagcccg
ctggcgcacctgcaaagcgagttcgccggcctggaacagcgcctcaacgaacgtctggtc
gaacgcctgcaacaggagcgtgacccggcgcggcgcgacctgatctacggcttcccgcag
cagttcggtgcgttgaaggattgcctgcaaagcttcctcgaaggtgtgttcaagcccaat
gcctttgaagagcgtgtgctgctgcgcggtgtgtatttcaccagcggcacccaagaaggc
agtccgattgatcgcttgatcggtgcgatggcgcagagcatgaacctggaccgccagcac
ctggcgcgtcagagcggcacagggcgcagttacttcatcgaaaaactcttcaccgccgtg
gcgtttgccgagcgtggcctagtgggtgtgaaccccaaggtcgagcgtcgacgcaagtgg
attgcgcgcggtgtgctcgccgccaccgttgcgttggtcgtggtggtcagcagtttgtgg
tgggtgagttaccgcgccaaccaggcgtatatcgcccaggtcgaccagaaggtcgcgccg
ctgggccagactgtgcagaacctgagcccggcgcagcgtgacatcctcgctgtgctgcca
ttgctcaacgctgtgaagaacctggcgggcgactctccaagctggtccgaagggttgggg
ctgtaccagggcgacatgcttgaagccgagtctgccagcgtctaccgcaagctgttgatc
gcggtgttcgcaccacgcctggtgacgcgtatcgaagaacaactgcacggcggcggcaat
tccgacttcctttacgaaggcctcaaggcctacctgatgctcgccgattccgagcattac
gacccggacttcatcaaggcctggatcgccctcgactgggaccgcaacctgccacgcgac
ctgccggcggatcagcgccaggcgctggccgggcacttgcagtcgctgttcgaacgccat
ccgcccactgcgcgcctggatccccggctgatcgacgatctgcgtcgccagttgcaacaa
ctgccggtggcccaacgtgtgtatgaccgggtcaagcgccagaaactgcctgaaggcatc
ccggactttcgcctcaacgaagccgccggccgtgacgctgcgctggtgttcagccgcaaa
agtggcaagccattgggcgagccgttgagtgggttcttcaccgccaagggctatcgccag
gcgtttctgctgagcagcctgaaccagaccggcaccctcgctgaagaacaatgggtgttg
gggcacgaacaggccgaccagcagaacgtggtgagcctggctgccgatgtgcggcgcctg
tatttccaggattaccagcgccagtgggatgcgttgctggcggacatcgacttcgtgccg
atcaccagcgtggcccaggcggccgacgtgctgcgggtgatttccggcccgacctcgccg
ctgaaaaagctgctggtggccgtggccaaggaaaccgatctgcaagccgaagaacgccag
ttggccgccaaaggcgtgccggtagaagggggtgtcgacaagctcaaggagcgcctgggc
agcctgctcggccaagagcagccggctgcgaatgcgccagcggcggcggatgatcctgtg
accgcgcactttgccgaactcaacagcatcgtcagcaagaacgaaggcgagccggcggcc
atcgatggcctgctcacggacatgaatgcgctgtatgtgcaggtcagcgccatggtcggc
gccagcggcgacgcgttgctcggtgaggcgaaaaaccaagcggcggctgcggccacgcgc
gtcagcctgaatgccgagcgccagccaccgctggtgcagggcatggtcaagtcggtggtc
aattccaccaccaatagcatgatgggcggggtgcgcaatcaactgaacgcggcctgggtc
agcgaagtggtcaacgtgtatcgccagtcgctggccgggcgttacccgatgtcgccgggc
agcgcgcgtgacgcgaccctggatgacttcgggcagttctttggcgtgggcggggtgatg
gacaactacttccgcaagtacctgcagccttacgtcgacacctccgcgcagacctggcgc
tggcagccgggcgcggcgcagaagcttgggattgcgccgggcgtgctgcaaaccttccag
cgtgccgcgaccattcgcgatgcgttcttccgcgccggtggcacccagccgattgtgcgt
ttcgaactcaagccggtgtcgatggacccgaccatcactcagttcctgttggacctcgac
ggccaacaactgagctacgatcacggcccgagccgcccggtagcgatgcaatggccaaac
cccggcagcattggcgtggtgcgtatctccatcatgccgccgtcggccagtggccgttcc
ggcgtgaccctggacgggccctgggcctggttccgcttgctggagcagtcagacctcacc
gccggtaactcgccggaccgtttcaacctgcgcctgcgcgtcgatggcgcaagcatcgcc
tacgaattgcgcgccaacagcgccttcaacccgttcaagagccgcgtgctcagtggcttc
agcctgccggagcggttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system