KEGG   Pandoraea faecigallinarum: AB870_02105
Entry
AB870_02105       CDS       T03972                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
pfg  Pandoraea faecigallinarum
Pathway
pfg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pfg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AB870_02105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfg03021]
    AB870_02105
   03400 DNA repair and recombination proteins [BR:pfg03400]
    AB870_02105
Enzymes [BR:pfg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AB870_02105
Transcription machinery [BR:pfg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AB870_02105
DNA repair and recombination proteins [BR:pfg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AB870_02105
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AKM29170
UniProt: A0A0H3WP40
Position
complement(3144525..3144731)
AA seq 68 aa
MARITVEDCLKQIPNRFELALAATYRARQLAQGHTPKLENNKDKPTVVALREIAAGQVGI
EMLKKVPL
NT seq 207 nt   +upstreamnt  +downstreamnt
atggcccgaattaccgttgaagattgcctgaaacaaattccgaatcgcttcgagctcgca
ctcgccgcgacctaccgcgcccgccagctggcgcaaggtcatacgccgaagctcgaaaac
aacaaggacaagccgactgtcgtcgcgctgcgcgaaatcgcggcgggccaggttggcatc
gagatgctcaagaaagtgccgctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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