KEGG   Plasmodium falciparum HB3: PFHG_00913
Entry
PFHG_00913        CDS       T01052                                 
Name
(Broad) cell differentiation protein rcd1
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFHG_00913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfh03019]
    PFHG_00913
Messenger RNA biogenesis [BR:pfh03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PFHG_00913
SSDB
Motif
Pfam: Rcd1
AA seq 651 aa
MVINNDMVKGSNKMKNLNKNIFPVNPNNNVVSNINSSKLNQGGVCIAEDINMGSVNNTND
LNNSDEIINCGNMNKSEDINKPGDINNSDDVNNPDDINNKINVNGIHSPLNESLQNLDRN
NMSVCNLGNVTTPVNNINNNINNNINCNNNNNNNNNNNSSNSNSNSNSNPICINNNENNK
YKNSNKCNDFHKDNTTSEQDQTKNDNNINNLSSGQENTINNEEEKKKVYQLVYDLCFSEK
RENALLELSRKRETYHDIAPVLWNSFGTITTLLQEIVSIYPQLSPPLLTTSSSNRVCNSL
ALLQCVASHPETKQHFLNAHIPLFLYPFLNAESKNRPFEYLRLTSLGVIGALVKVDNPEV
INFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILIDELGLNYICATPERFYAVSTVLA
NMVNSLVENPSSRLLKHIVRCYLRLSENARALEALKYCLPEPLRHVHKTFLPCLKEDPFT
KKWLLQLLYNINNDDENLTMKNTNFINHNTNQNTSNINNQTLNKISQNVYTNLNVPTALN
EININIPKTDTHTNIHNINDNIENSSSQSFNNKINDTNLKCGKINNNKLNPDLTNNDIND
NNINDNNNDNNDNNNINDNIMNDDNNNINGDSVNNNNMNDDSVNNNNMNDN
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggtgattaataatgacatggttaaaggtagtaataaaatgaagaatttaaacaagaat
atttttcctgtgaatccaaataataacgtcgttagtaatattaattcaagtaagcttaat
caaggtggtgtatgtatagcagaagatataaacatgggtagtgtgaataacacaaatgat
ttaaataattcggatgagataattaactgtggaaatatgaataaatcggaagatataaac
aaacctggagatataaacaattcagatgatgtaaacaatccagacgatataaataacaaa
attaatgtaaatggtattcatagtccattaaatgaaagtttacaaaatttggatcgtaac
aacatgagtgtatgtaaccttggaaatgttaccacaccggttaacaatataaataataat
ataaataataatataaattgtaataataataataataataataataataataatagtagt
aatagtaatagtaatagtaatagtaatcctatatgtattaacaataatgagaataacaaa
tataagaactccaacaaatgtaatgattttcataaggataatacgacaagcgaacaagat
caaacaaagaatgataacaatataaataatttatcatcgggtcaagaaaatacaataaat
aatgaagaagaaaaaaaaaaagtttatcaacttgtatatgatttatgcttttctgaaaaa
agagaaaatgctttacttgaattatctagaaaaagagaaacttatcatgatattgctcct
gttctttggaactcctttggtaccattacaacattattacaagaaatagtttctatatat
ccacaattatcaccaccattattaactacatcttcttcaaatcgtgtttgtaattcttta
gcgcttctacaatgtgtagcttctcatccagaaaccaaacaacattttttgaatgcacac
attccattatttctctacccatttttaaatgctgaatccaaaaatagaccttttgaatat
ctaagattaacatcattaggtgttataggtgctcttgttaaagttgataatccagaagtt
attaatttccttctacaaacagaaattatacccttatgcttaagaattatggaaaccgga
agtgaattatcaaaaacagttgctacctttattgttcaaaaaattctgattgatgaatta
ggcctaaattatatttgtgcaacacccgaaagattttatgctgtttctaccgtactagcc
aatatggttaattcgcttgttgaaaatccttcctcaagattacttaaacatattgtacga
tgttatttaagattatcagaaaatgcaagagcgctagaagctctgaaatattgcttacct
gaaccattaagacatgttcataaaaccttcttgccatgtttaaaagaagacccatttaca
aaaaaatggttattacaattattatacaatataaacaatgatgatgaaaatctaactatg
aaaaatacaaactttattaatcataatacaaatcaaaacacatcaaatataaataatcaa
acgctaaataaaatctcccaaaatgtttatacaaatttaaatgttcccacagccttaaat
gaaatcaatattaatatccctaaaacggacacacacaccaatattcataatataaatgat
aatatagaaaatagctcaagtcagtccttcaacaataaaatcaatgatactaaccttaaa
tgtgggaaaatcaacaataataagttgaaccccgatctaactaataatgatataaacgac
aataatattaatgacaataataatgataataatgataataataatattaatgataatatt
atgaatgatgataataataatattaatggtgatagtgtaaataataataatatgaatgat
gatagtgtaaataataataatatgaatgataattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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