KEGG   Pyrococcus furiosus COM1: PFC_05690
Entry
PFC_05690         CDS       T02183                                 
Name
(GenBank) transcription factor
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
pfi  Pyrococcus furiosus COM1
Pathway
pfi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PFC_05690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfi03000]
    PFC_05690
   03021 Transcription machinery [BR:pfi03021]
    PFC_05690
Transcription factors [BR:pfi03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    PFC_05690
Transcription machinery [BR:pfi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PFC_05690
  RNA polymerase III system
    TFIIIB
     PFC_05690
  RNA polymerase I system
    SL1/TIF-1B
     PFC_05690
SSDB
Motif
Pfam: TBP DUF3378 DDE_Tnp_1_assoc PhoPQ_related
Other DBs
NCBI-ProteinID: AFN04079
UniProt: I6TXD4
Position
1019860..1020435
AA seq 191 aa
MVDMSKVKLRIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIF
SSGKLVVTGAKSVQDIERAVAKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREFNLDVV
ALTLPNCEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDK
YGLLEEEEEEL
NT seq 576 nt   +upstreamnt  +downstreamnt
atggtggatatgagcaaggttaagctcaggatagagaacatagttgcttccgtcgatctt
ttcgctcagctcgaccttgaaaaagttcttgatttgtgcccaaattctaagtacaatcct
gaagagttcccaggtattatttgtcatctcgatgatccgaaggttgctctcttgatcttc
agctctggaaaacttgtcgttaccggcgctaaaagcgttcaagacattgaaagggctgta
gctaagcttgctcaaaagctgaagagcattggagttaagttcaagagggcaccacagata
gatgtgcagaatatggtgtttagcggtgacattggtagggaatttaatttagacgtggta
gccttaaccttgccaaactgtgagtatgaaccagagcagttcccaggtgtgatatataga
gtcaaggaaccaaagtcagtgattctcctattctcgtctggaaagatcgtttgttctggt
gcaaagagtgaagcagatgcctgggaggcagtgagaaagctgttgagagaattggataag
tatggactgctagaggaagaagaggaggagctttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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