KEGG   Pyrococcus furiosus COM1: PFC_07005
Entry
PFC_07005         CDS       T02183                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
pfi  Pyrococcus furiosus COM1
Brite
KEGG Orthology (KO) [BR:pfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pfi03016]
    PFC_07005 (truD)
Enzymes [BR:pfi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     PFC_07005 (truD)
Transfer RNA biogenesis [BR:pfi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PFC_07005 (truD)
 Prokaryotic type
    PFC_07005 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AFN04337
UniProt: I6U8D5
Position
complement(1249751..1250974)
AA seq 407 aa
MSDPVGGLKYLTTSPGIGGKIKVYPEDFIVKEVIPKSIFKAGKCKIYILKKKNWETMAAI
KEIAKRVGVHYSEIGFAGTKDRHAVTYQYISICRDVNLEEVKIRDIELKFVGYGRPLKLG
FLLGNFFKIRVRESNPSLLPSVIEEAKEKGGFPNYFGIQRFGEKRSVNHVVGKLLLLGKY
EEAAEVFLGFPGKGMEGDEARRKFLETKDVDLALREFPNFLRYERAMLYRYKETGSWKKA
FLVLPRPILRIFIHSFQSYLFNLYLSRRIEEGLPLNKALPGDIVIQVKKGIPLRKRTYRV
TENNVDFVNRKIKEGEAMVSGPIFGYMYRKGKGIPGRLEEEILEEAGVKLEYFKKLPKPM
REPGGRRELLIRPMKFAYKVEDRDVIFRFFLPKGVYATSVLREIMKN
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgagtgatcctgttggagggctgaagtacttgacaacttctcctgggataggtgggaaa
attaaggtatatcccgaagatttcatagttaaagaggttattccaaagtccatttttaaa
gctgggaaatgcaaaatatatattttaaagaagaaaaattgggaaaccatggccgcaata
aaggagattgcaaaacgagtaggagttcattattcggaaattggctttgcaggaaccaaa
gatcgacatgctgtgacttaccagtatattagcatttgtagagatgttaacttggaagag
gtgaaaattagagatattgagctcaagttcgttggatatggaagacctctaaagcttggc
tttctcctggggaacttctttaagattagggttagagaatccaatccctcactgttgcca
agtgtaattgaagaagccaaagaaaagggaggctttccaaattattttggcatacaaagg
tttggtgaaaagaggagtgtaaatcatgttgttggcaagctacttctcttgggaaaatat
gaagaggctgcggaagtatttttgggattcccaggaaaaggaatggaaggagatgaagct
agaagaaaatttctggagactaaggatgttgatcttgctcttagggagtttccaaacttc
ttgagatatgagagagcaatgctctacagatacaaagaaacaggtagctggaagaaagca
tttttagttcttcctcgaccgatactgaggatatttattcactccttccagtcctatctc
tttaacctttatctttctaggagaattgaagagggacttcctttaaataaagctctccca
ggtgatatagttattcaagtaaagaaaggcatacccttgagaaagagaacgtatagagtc
accgagaataacgttgattttgttaatagaaaaattaaagaaggtgaggcgatggtttct
ggccctatttttggctatatgtacagaaaaggaaagggaattcctggaagattggaggaa
gagattttagaagaagcgggagtcaaacttgaatactttaagaagcttccaaaaccaatg
agggagcctgggggaagaagggaattactgataaggccaatgaaatttgcatacaaagtt
gaggatagggatgttatctttaggtttttccttcctaaaggagtttacgcaacaagcgtt
ttaagggagataatgaaaaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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