KEGG   Pandoraea fibrosis: PI93_009065
Entry
PI93_009065       CDS       T06385                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
pfib  Pandoraea fibrosis
Pathway
pfib03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PI93_009065 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfib03400]
    PI93_009065 (recB)
Enzymes [BR:pfib01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     PI93_009065 (recB)
DNA repair and recombination proteins [BR:pfib03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PI93_009065 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_11
Other DBs
NCBI-ProteinID: QHF12776
Position
2015828..2019670
AA seq 1280 aa
MTRLIDLDVFSCDLDGVCLIEASAGTGKTWNICALYVRLLLEKQLTVEQILVVTFTNAAT
AELRERIRGRLAGLVAAMAPVFEADDETSGEAQDEEDAFPDFDPDASDDPLFNVMIAGLI
ERGEMTPKAIRDCLQTALRAFDQASIHTIHGFCQRALAEVPFAAGLPFAYELVPDDNGVR
HDLAVEFWRRVVEPMAAQDDGFAAWLVDRKRSPGTLTDQLARRLKKPMSALRWPPAVEAH
AQTSPDSALLSTYAAAAECWEAEASAIADLMRVALPSYKKNIYHETSLAQAVSAWQRYLG
ASDAGALLSPKAELLTTTRLAKDIKKGETPPDHRFFGMADVLVRARAEADERYAMQWLRI
LREWLGQAPDQLALRKRELRVVSFDDLLGNIARALTQHPDLADALRTRYPCALIDEFQDT
DPLQFAIFNAVYGAREAAAPDETPGPMFMVGDPKQAIYSFRAADLHTYLAARENADAAYT
LAVNQRSTPAIIEAGNRLFGANDRAFVLEGLEYPPVRPGARRRPPLSDVREVADFTVWWL
PDDDEPLSKDEAQQACARATAAEVARLLAGASHGEVRVGERPLAPADIAVIVQTHRQGAL
MKAMLAEHAVGSVELTQDSVFASEEAETLLRVLRAVESPGDVRALRAALATELFGLDATA
LYRMQTSEASDAEAIAWIERLQRYRQLWIDRGFSAMWRTLMRELGLAARLVAQSGGERRL
TNFMHLAELAQSRWAEQPGMPALLRWLASQRNASGGEEAQLRLESDQNLVQIVTVHKSKG
LEYGVVFCPFLWDGAVRDGGSLEGLEYHDGPTAVIDFTDAAAKGSAAAAALRQEQSAEQA
RLLYVALTRAVYRCYLAAGIYTSRRSVKEACGGMLNWLAAGQGIPFDAWTTSTVDTDERV
ATIRAAWNALVGGPLAVVPLPTGDALDAGTRVAHEAAPEITTRASTRALREVWRIGSFSG
LLAGMHAGPQLGGGQLSAPERTRPDYDAQANAGPTFALPPQSDDTWPPFDDILRFPRGPA
AGESLHRVFELADFQSRAQWPHAVSRALRERPPGRGAEQNDTWRAMMMNMLADTLATPLR
PGMQLADVALTERLTEMEFTYPADAVSLDALRGLLRQFGYPDLPLDATVLRGYLKGFIDL
VFRHGGQWWILDWKSNYLGTAPENYGADGLREAMAEHGYHLQYLLYTLALHRYLQRRMTN
YDYERDMGGSLYLFIRGVRPDWASAHLAGDDVPGVFFDKPSREMVDALDRLFAAGENAAL
AQALSLDAPSGDASPGGEGA
NT seq 3843 nt   +upstreamnt  +downstreamnt
atgacccggctcatcgacctcgacgtcttcagttgcgatctcgatggcgtttgtctcatc
gaggcgtcggccggtaccggcaagacctggaacatctgcgcactgtatgtccgcttgctg
ctggagaagcaactgacggttgagcagattctcgtcgtcacctttaccaatgctgcgact
gccgagttgcgcgagcgcattcgcgggcgcctggccgggctggtcgccgcgatggcgccg
gtcttcgaggcggatgacgaaacgagcggcgaagcgcaagacgaagaagacgcgttcccc
gacttcgatcccgacgccagcgacgacccgctgttcaacgtgatgatcgcggggttgatc
gagcgtggcgagatgacgccgaaggccattcgcgactgtctgcaaacggcgttgcgtgca
ttcgatcaggcatcgatccatacgatccacggattctgccaacgggcgctcgcagaggtg
ccgtttgctgccggcttgccgttcgcttacgaactggtaccggatgacaacggtgtgcgt
cacgatcttgcggtcgaattctggcgtcgcgtcgtcgaaccgatggcggcgcaggacgac
ggtttcgccgcgtggctcgtcgatcgcaagcgttcgccgggcacgctcacggaccagttg
gcgcgtcgtttgaagaaaccgatgtcggcgctgcgctggccgccggcggtggaagcacac
gcgcagacttcacccgattcggcgttgctctcgacgtatgcggcggcggccgaatgctgg
gaagccgaagcttcggcgattgccgatctgatgcgcgtggcattgccgtcgtacaagaag
aacatctatcacgagacctcgcttgctcaagcggtgtcggcgtggcaacggtatctgggc
gcgagcgacgccggtgcgctgctcagtccgaaagcggagttgctcacgaccacgcgtctg
gccaaggacatcaagaagggcgagacgccgcccgaccaccggttcttcggcatggccgac
gttctcgtgcgcgcgcgtgccgaggccgacgagcgctacgcaatgcagtggctgcggatt
ctgcgtgagtggctgggacaagcccccgatcaactggcgcttcgaaaacgtgagttgcgc
gtggtgtcgttcgacgacctgctgggcaatatcgcgcgtgccctgactcagcatcccgat
ctggccgatgccttgcgcacgcgttatccctgtgcactgatcgacgagtttcaggatacc
gacccgctgcaattcgccatcttcaacgctgtgtatggtgcgcgcgaagccgctgcaccg
gatgagacgccggggccgatgttcatggtcggcgatccgaagcaggccatttacagtttc
cgggcggcggatctccatacctatctggcggcgcgcgaaaacgccgacgcggcgtacacg
ctcgctgtcaatcaacgttccacgccggccatcatcgaggcgggcaatcgtctgtttggg
gccaacgaccgggcgttcgtgctcgaagggcttgagtatccgccggtgcgtccgggggca
cggcggcgtccgccattgtcggatgtgcgcgaagtggccgactttaccgtctggtggttg
ccggacgacgatgaaccgctgtcgaaagacgaggcacaacaggcttgcgcccgtgccacg
gctgccgaggtggcgcgcttgctggccggcgcatcgcacggcgaggtgcgggtcggggag
cggccgcttgccccggcagatattgcagtgatcgtgcagacgcaccggcagggcgcgttg
atgaaagcgatgctcgcggaacatgcggtggggagtgtggagctcacgcaagactcggtg
tttgcgagcgaggaagccgaaacgctgttgcgggtattacgtgcggtggagtcgcccggc
gatgtgcgcgcgttgcgggcggcgcttgccaccgaattgttcgggctcgacgccacggcc
ctgtatcgcatgcagaccagcgaggcttccgatgcggaagcgattgcgtggatcgagcgg
ttacagcgctatcgtcaattgtggatcgaccgcggcttctcggccatgtggcgcacgctc
atgcgcgagttggggctggcggcgcgtctggtggcacagtcgggcggcgagcggcgtctg
acgaacttcatgcatctcgcggagcttgcccaatcgcgctgggcggagcaaccgggcatg
cctgcgttgctgcgctggctggcgtcgcagcgcaacgccagtggcggcgaggaagcgcag
ttgcgtctggagtcggaccagaatctggtgcagatcgtgaccgtgcataagtcgaagggg
ctcgagtacggtgtggtcttctgcccattcctgtgggatggggccgtgcgcgatggcggc
agcctcgagggtctcgaataccatgacggtcccacggcagtgatcgatttcaccgatgcg
gctgccaagggctccgcggcggcagcggcgttacgccaggagcagtcggcggagcaggca
cggttgctgtacgttgcactcacgcgtgcggtctatcgatgctatctggcggcggggatt
tacacatcgcgccggagcgtgaaagaggcgtgcggcggcatgttgaactggctggccgcc
gggcagggcataccgttcgatgcgtggacgacgtcgacggtcgataccgatgagcgggtc
gcgacgattcgcgcggcatggaacgcgctcgttggtggcccgttggcggtcgtgccgcta
ccgacaggtgacgcgctcgatgccggaacacgcgttgcccacgaggccgcccctgaaatc
accacgcgagccagtacacgagctttgcgcgaagtctggcgcattggcagcttttcgggg
ctgctggcggggatgcacgcggggccacaattgggcggggggcagttgagtgcgccggag
cgcacgcgtcccgactacgatgcgcaagcgaatgccggtccgacgttcgcgttgccaccg
cagagcgacgatacctggccaccgttcgacgatattcttcgtttcccacgtgggccggcc
gctggtgagagtctgcaccgtgtgttcgagcttgccgatttccaatcgcgcgcgcagtgg
ccgcacgcggtctcgcgcgccttgcgggaacgtccgccggggcgaggagccgagcagaac
gatacctggcgagccatgatgatgaacatgctggccgacacgctcgcgacgccattgcgt
cccggcatgcagttggccgatgtcgccctgacggagcggctcaccgaaatggagttcacg
tatccggccgatgccgtgtcgctcgatgcgttgcgtggcttgttacgtcagttcggatac
ccggacttgccgctcgacgccacggtgctgcgtggctacctcaaaggcttcatcgatctg
gtattccggcatggcggccaatggtggattctcgactggaagtcgaattacctcggcacg
gcgccggagaactacggcgcagatggcctgcgcgaagcgatggccgagcacggctatcac
ctgcaatatctgctctacaccctggcgttgcaccgctatttgcaacgacgtatgacgaac
tacgattacgaacgagatatgggcggcagcctctatctctttatccggggcgttcgaccc
gactgggcgagtgcgcatctcgccggtgacgatgttccgggcgtgtttttcgacaagccg
tcgcgcgagatggtcgacgcgctcgaccggctattcgcggcgggcgaaaatgcggcactg
gcgcaagccctgtcgctggacgcgcccagcggcgacgcgtcgcccggcggggagggcgca
tga

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