KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_112167
Entry
MYCFIDRAFT_112167 CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K13174  THO complex subunit 5
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MYCFIDRAFT_112167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfj03019]
    MYCFIDRAFT_112167
   03041 Spliceosome [BR:pfj03041]
    MYCFIDRAFT_112167
Messenger RNA biogenesis [BR:pfj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MYCFIDRAFT_112167
Spliceosome [BR:pfj03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MYCFIDRAFT_112167
SSDB
Motif
Pfam: FmiP_Thoc5 Vesi_VP2
Other DBs
NCBI-GeneID: 19330213
NCBI-ProteinID: XP_007928997
JGI: 112167
UniProt: M3A5J5
Position
Unknown
AA seq 199 aa
ITDPTLLSVLSAAAESRRQCLEMLTFIEQNGASAYESSDLNLSQKKLASRLAILRGLNRN
AVMSVRATKQETTEARQEIDSLHLTLQNLFYEQRHLRGEIGACEEYDHKYLSLPMLPVED
FLAEHPQFLEASDHEVTIARIHAEYEARRALEEQRLKLVKRKLELEKETLGKKEELARLD
LEIERWVAGQGKVLEVFNK
NT seq 597 nt   +upstreamnt  +downstreamnt
atcaccgacccaaccctcctctccgtcctctccgccgccgcagaatcccgccgccaatgt
ctcgaaatgctcaccttcatcgagcaaaacggcgcctcagcctacgaaagctccgacctc
aacctctcccaaaagaaactcgcctcccgcctcgcgattctgcggggtttgaatcgcaac
gctgtcatgagtgtgcgggctacgaaacaagaaactacggaagccagacaggaaatcgat
tcgctgcatcttacgttgcagaatttgttttatgagcaacggcatttgaggggggagatt
ggggcgtgtgaggagtacgatcataaatacctttccctccccatgctccccgtcgaagac
ttcctcgcggaacatcctcagtttctcgaggcctcggatcatgaggttacgattgcgagg
attcacgcggagtatgaggcgagacgtgcgcttgaggaacagaggttgaaacttgtgaaa
cggaagttggagcttgagaaggagactctcggcaagaaggaggagttagcgaggttggat
ttggagattgagaggtgggttgcggggcaggggaaggttttggaggtttttaataag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system