KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_145158
Entry
MYCFIDRAFT_145158 CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCFIDRAFT_145158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfj03019]
    MYCFIDRAFT_145158
Enzymes [BR:pfj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     MYCFIDRAFT_145158
Messenger RNA biogenesis [BR:pfj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MYCFIDRAFT_145158
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MYCFIDRAFT_145158
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1 Phage_fiber
Other DBs
NCBI-GeneID: 19331303
NCBI-ProteinID: XP_007931429
JGI: 145158
UniProt: M2ZZN3
Position
Unknown
AA seq 696 aa
MFNNHNHRQNHGMLNGSAAHHNFQPQVNLSKAFQSQSQGQHQGHHVNSQHNDHSGLSGHT
NNFGNHQHTISASTLSNTTPHFTPAHLTNGTPDNSNVPKPMNEHWATQIQEYQKMRMADQ
KTHYYARTTPSVSRYPGQSNGSNATQQNGEENGERRRITDESEDMGTWDAMDLCGQGLKA
IAPALFQRYPRLKKIFLAWNSLRAIPPQIGQMRFLTVLDLSMNNLSYLPPEIGMLTNLKK
LSLYDNHLDDLPFELGFLYRLEMLGIEGNPMRPDYKERLMEHGTQELIRYLREQAPTPDP
PTDRAWIPLIEEQSDGTDTFSLLSWNILCDRAATATMYGYTPSEALSWQRRRAMILDELR
GRQADIMCLQEMDMENYNEFFRPNLASDDYKGVFWPKSRAQTMQEREAKVVDGSAIFFKN
SKYILLDKQLIVFSQEAIRRPDMKGEHDVYNRVMPRDHVAVIAFLENRATGSRVIVANTH
LTWEPWHSDIKIVQVAIMMEAIARFAEGYSKWPPCKDKEVFKYANEDGMDDSNQPPPAPG
PSLKYDESTHIPLVVCGDFNSTRDSGVYDLITQGSLSNSHSELGDNNYGDFTRHGMSHPF
SLKSVYSHIGELPYTNYTPDFRQTIDWVFYSTNSVQVNKVLGEPDQEYMRRVPGWPNHYF
PSDHLPLVMELQVKERKERKQVETDFGASRKAGHNN
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgttcaacaaccacaaccatcgtcagaatcatggcatgcttaacgggagcgcggcgcac
cacaatttccagccgcaggtgaacttgagcaaggcttttcagagccaatcgcaaggccag
catcaaggtcaccacgtcaatagccagcacaatgaccacagcggactgagcgggcacacc
aacaacttcggaaaccaccagcacaccatctcggcaagcacgctgtcaaacacgactcct
cactttacacctgcgcacctcaccaatggcacaccagacaattcgaacgtaccgaagccg
atgaacgagcattgggcgacacagatccaagaataccagaaaatgaggatggcggatcag
aaaacacactactacgcgagaacaacgccgtccgtgagcagatatcctggacagtctaat
gggtccaatgcaacccagcagaatggcgaggagaacggcgagaggcggcgcataacagat
gagtcggaagacatgggtacatgggatgctatggacctgtgcggccaaggcctgaaagcc
attgcacctgcactgttccaacgctacccaaggctgaagaagatattcctggcgtggaac
agccttcgagcgatacctcctcaaattgggcaaatgcgctttctgacagttcttgacctc
tccatgaacaacctctcatacctaccaccggagattggtatgctcacgaacttgaagaag
ctttcactctacgacaatcaccttgacgacctgcctttcgagcttggctttctctatcgg
ctagaaatgcttggcattgaaggcaacccaatgcgaccggactacaaggagcggctcatg
gaacacggaacacaagagctaattcgctatctccgggagcaggcaccaactcctgatcca
ccgactgaccgagcctggataccgctaattgaagagcaatcggacggaactgatacattc
agcttgctcagctggaacattctttgcgacagggctgcaaccgccacgatgtatggctat
acaccttctgaagcattgtcatggcagcgaaggcgggctatgatcctggacgagctgcga
ggacgacaagcagacatcatgtgtttgcaagaaatggacatggagaattacaacgagttc
ttccgacccaatctggcatctgatgactacaagggcgtcttttggccgaagtcgagagcg
caaaccatgcaggagagagaggccaaggtggtcgatggaagtgcaattttcttcaagaat
tccaagtacattctacttgacaagcaattgatcgtctttagtcaagaagccataaggaga
cctgacatgaagggcgagcacgacgtgtacaaccgcgtcatgccacgagaccacgtagca
gttattgctttcttggagaatcgcgcgaccggttcgagagtgattgttgcaaacacgcat
ctcacttgggagccttggcacagcgatatcaaaatcgtgcaggtcgccatcatgatggaa
gcaattgctcgatttgccgagggatactccaagtggccaccgtgcaaagacaaggaagtc
ttcaaatacgcaaacgaagatggcatggacgattcaaatcaacctccgcctgcgccagga
ccatctttgaaatacgacgagagtactcacatcccattagtggtgtgtggagacttcaac
tcaacgcgcgattctggagtctacgacctcataacacaaggttcgctgtcgaactcacac
tccgaactgggcgacaacaattatggtgacttcacacgccacggcatgagccacccattc
agcttgaagtcggtgtacagccacattggtgaactgccgtacaccaactacacgccggac
ttccgacaaacgatcgactgggtgttctactccaccaactccgtgcaggtaaacaaggtt
ctcggagagccggatcaggagtacatgcgacgcgtaccaggatggcccaaccactacttc
cccagtgaccatctgccattggtcatggaactacaagtcaaggagcgtaaggagcgaaaa
caggtcgagacagactttggtgcatctcgaaaggcgggtcacaacaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system