KEGG   Pseudomonas frederiksbergensis: PFAS1_11745
Entry
PFAS1_11745       CDS       T04786                                 
Name
(GenBank) type VI secretion system-associated lipoprotein
  KO
K11906  type VI secretion system protein VasD
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PFAS1_11745
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfk02044]
    PFAS1_11745
Secretion system [BR:pfk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PFAS1_11745
SSDB
Motif
Pfam: T6SS-SciN DUF6491 GDE_N_bis
Other DBs
NCBI-ProteinID: APV39985
UniProt: A0A1P8EUS5
Position
2556789..2557295
AA seq 168 aa
MIPRFLLAVATVLLLAACAKDTVKPEAAEAEADTAAVELHFHAIASLNPGTSGQPAPVRV
RIFELKNAATFGRADYFALAERAQATLGADLIDQDEVLVQPGQQLSLQRDLDPATRHIGV
LVGYRELDQAQWRTVMNVPPRQYTEYQISLDVRAVRSAVVVPPSSPAQ
NT seq 507 nt   +upstreamnt  +downstreamnt
atgattcccaggtttttactcgcagtcgccaccgtgcttctgctggccgcgtgtgccaag
gatacggtcaaacccgaggccgctgaggccgaggccgacaccgccgccgtcgagttgcac
ttccacgccatcgccagcctcaaccccggcaccagcggtcaaccggccccggtccgggtg
cgcattttcgaactgaaaaatgccgccaccttcggccgtgccgattatttcgccttggcc
gaacgggcccaggcgacgctcggcgcagacctgatcgaccaggacgaagtgctggtccag
cccggccagcaattgagcctgcaacgcgacctcgatccggccacccgccacatcggtgtg
ctggtgggctatcgcgaactggatcaggcgcagtggcgcacggtgatgaatgtcccgccg
cgccaatacaccgaataccagatcagcctcgatgtgcgcgccgtgcgcagcgccgtcgtg
gttcccccatccagccctgcccaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system