KEGG   Pseudomonas protegens Pf-5: PFL_0334
Entry
PFL_0334          CDS       T00249                                 
Name
(GenBank) polyamine/opine/phosphonate ABC transporter, POPT family, periplasmic substrate-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PFL_0334
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pfl02000]
    PFL_0334
Transporters [BR:pfl02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    PFL_0334
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_1 SBP_bac_6 TAT_signal DUF5934
Other DBs
NCBI-ProteinID: AAY95744
UniProt: Q4KJV4
Position
complement(385102..386214)
AA seq 370 aa
MSQHHQRDCIEILIEKARGGQVSRRTFLQAMGLLAAVPLALRSGISWAADKPLVVVNWGG
DALNAFRSAWTDSFTKSTGIPVRIDGAGPTEGAIRSQLASGRPSWDVVDVDSYSAMTLGR
DKVLQPLAYSVVQRDLVAPSLSHEHGIAGYLFSYVIAWDSQKFGDNGPKDWTDFWNVEKF
PGKRTLYKWMNGMLEAALLADGVAAEQLYPLDVPRALRKIDELKPHVLSFWGSGAESQQL
MIEGEASMGAIWHTRATLLHEDSGGRIKWGFDHAFLNASSWGVLKDNPAGTAPAMQFIQH
ALQPAGQLKLFEALGNGPSNAATQQLMSAEQREINCASEANMKKQIFLDTQWYADHYSST
LEQYLTHLSK
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgagccagcaccatcaacgcgactgcattgaaatcctcatcgaaaaagcccgcggcggg
caggttagccgccgcaccttcctccaggccatgggcctgctggcggcggtgcccctggca
ttgcgcagcggtatcagttgggccgccgacaagcccctggtggtggtcaactggggcggc
gacgcactcaatgcctttcgcagcgcctggaccgacagcttcaccaagagcaccggcatc
ccggtgcgcatcgacggcgccggccccaccgaaggggccatccgttcgcagctggccagc
ggccggccgagctgggacgtggtggacgtggacagctacagcgccatgaccctgggccgc
gacaaggtcctgcaacccctggcctacagcgtggtgcagcgggacctggtggcgccgtcg
ctgtcccacgagcacggcatcgccggctacctgttcagctacgtgatcgcctgggacagc
cagaagttcggcgacaacggccccaaggactggacggatttctggaacgtggagaaattc
cccggcaagcgcaccctctacaagtggatgaacggcatgctcgaagccgcgctgctggcc
gatggcgtggccgccgagcagttgtacccgctggacgtgccccgcgccttgcgcaagatc
gatgagctcaagccccatgtcctgtcgttctgggggtcgggtgcggaaagccagcagttg
atgatcgaaggcgaagcctccatgggcgccatctggcacacccgcgccaccctgctccac
gaagacagcggcggccgcatcaagtggggcttcgaccatgccttcctcaacgccagcagc
tggggcgtgctcaaggacaaccccgcgggcaccgcaccggccatgcagttcatccagcac
gccttgcagccggccgggcaactgaagctgttcgaggccctgggcaacggcccgtccaac
gccgccacccagcaactgatgagcgccgaacagcgggagatcaactgcgcctccgaagcc
aacatgaagaagcagatcttcctcgacacccagtggtacgccgaccactactccagcacc
ctggagcagtacctgacccacctgtccaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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