KEGG   Pseudomonas protegens Pf-5: PFL_5312
Entry
PFL_5312          CDS       T00249                                 
Name
(GenBank) putative type IV pilus-associated protein
  KO
K02674  type IV pilus assembly protein PilY1
Organism
pfl  Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfl02044]
    PFL_5312
   02035 Bacterial motility proteins [BR:pfl02035]
    PFL_5312
Secretion system [BR:pfl02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   PFL_5312
Bacterial motility proteins [BR:pfl02035]
 Pilus system
  Pilus assembly proteins
   PFL_5312
SSDB
Motif
Pfam: Neisseria_PilC
Other DBs
NCBI-ProteinID: AAY94522
UniProt: Q4K5V3
Position
complement(6078049..6081111)
AA seq 1020 aa
MPSIDRGMRRPGWRSLGALLLSLLPVPLAMAFNPASTPLLGAAAVAPNVMLVLDDSLGMN
SIVHAREFDPLLARAAVWRCAGVGGECARGERLAGQAIALSSLGESGCRAGFHSFHDPER
GVRCLKLPDPVGAGNTLYSADYLSWLLAQAKGRERDFTDGSIPNDYRMNVARRLATALVT
RYRWLRLGLATFNPPAPGDPGPGGYIARPISDLSAIEGAVSPAQAEANYQALLATINGLK
AGGHTPLAETYYEITRYLRGMMPYYNLSPALYSSPIQYRCQKNYGVVISAGAADHDTQFP
LNDPLGAGRLPNWDGIGNDGGERDGQTLFLDDLAKFAFDIDLRGPGVDEAGKSWAAVDFP
RQYLNTFTVGFQAHNPLLMGAADYGQGEYYQARSNLEGVLAGVLGEGVASAVTAGSGVLD
AASGRYYQSQYDPVDWHGTIRAYGIDNQGRVAVGSPLWSSDSGVDGAGAAVIHETWNTAS
RRPVSLAYGNLSTAQRGELEQSLPAGVSGAELLGWSQGRSVSGLRERRYQLGDIVNSPLV
LATAGQRSAVDGAAGGDYSRYLAQKATAMATRLLVNSNDGLFNVLDPASGERLYGYMPSS
ALGALAQVADPGYRRGERHRYLVDGPLAVFDGQRGGAWQTLALGGVGAGGKSFFAVRLFD
AVHGNTPGALWEIGAPPEPDRNHPFNDLGYAYARPQVARLADGRWAAFIGNGYGSHSGVA
ALYVVDLNDGSLIREIAIDDQPDNGLSSVTLKVNARNEVQAAYAGDLKGRLWKFELSGND
SASWHLAFAGQPLFRTAGGASQPISVPPRLLDHPRGGQLVLFGTGKLNETRDKQSRARQG
FYGVWDAEGGPGGIGESQLQVQHLEAGFSAAAGSFLRSTLNEVRYPAQRGWYLPLVQGGL
AAGERVLNEATLVAGRVVFSTLQLEPDDPCSSAGSGKLIELEAFSGKMLDAAVLDTNGDG
VVDDQDQPSSGVRYVGTVPSLGGVASNGARKIISDSRGGISTLVERPGGGSRRILWRQIQ
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgccaagtattgatcggggcatgcgtcggcctggctggcgaagcctgggcgcgctgctg
ctgagcctgttgccggtacctctggccatggcgttcaaccctgccagcaccccgcttctt
ggtgccgcggcggtggcgccgaacgtgatgctggtgctggatgactccctgggcatgaac
agcattgtccatgcccgggagttcgatccgctgctcgcccgggctgcggtctggcgctgt
gccggagtggggggcgagtgtgctcggggtgagcggcttgcaggccaggcgattgccttg
tccagcctcggcgagtcggggtgccgggcaggctttcacagcttccatgatcccgagcgt
ggggtgcgctgcctgaagctgccggacccggttggggctggaaatacgctgtactccgcg
gactacctgtcctggctactggcgcaggccaagggacgggagcgagacttcactgacggt
tccattcccaacgactaccggatgaatgtggctcggcggctggccacggccctggtgacc
cggtatcgctggctgcgcctggggttggccaccttcaacccgccggccccgggtgatccg
ggccctgggggttacattgcccgtcccatcagcgacctgtcggccattgaaggcgctgtg
agcccggcccaggccgaggccaattaccaggccctgctggcgacaatcaacggcctcaag
gccggcggtcatacgccgttggcggaaacctactacgagatcacccgctacctgcgcggc
atgatgccgtactacaacctttcaccggcgctctacagcagccccattcaataccgttgc
cagaagaactacggggtagtgatcagtgccggcgcggcggatcacgatactcagttcccg
ctcaacgaccctttgggggcggggcgcctgcccaactgggacgggatcggcaacgatggt
ggcgagcgcgatgggcagactctattcctcgatgacctggccaagttcgccttcgatatc
gacttgcgtggcccaggagtggatgaggccgggaaaagctgggcggcggtggatttcccc
cgtcagtacctgaataccttcacggtgggtttccaggcccacaatcctctgctgatgggt
gctgcggactacggccagggtgagtattaccaggcccgcagcaaccttgaaggcgtgctg
gcaggcgttctgggcgaaggcgtagcgagtgccgtgactgccggcagtggtgtactggat
gccgccagtggtcgttattaccagagccagtacgacccggtcgattggcatggcacgatc
cgcgcctacggcatcgacaatcagggccgagtggctgtcggttcgccgttgtggagcagc
gatagtggcgtggatggtgccggcgcggcggtaatccatgagacctggaacactgccagc
cggcgtccggtgagcctggcctacggcaacttgtccaccgctcagcgtggcgaacttgag
cagtcgttgcctgcaggtgtcagtggcgccgagttactgggctggagccagggccgctcg
gtgagcgggctcagggagcgccgctatcagttgggagatatcgtcaattcgccgctggtg
ctggcaactgccgggcagcgcagtgctgtcgatggggctgccgggggcgactacagccgc
tacctggcacagaaagccacggccatggcgacgcgcttgttggtgaacagcaatgacggg
ttgttcaatgtgctggacccggccagcggtgagcgcctctatggctacatgccctccagc
gcgttgggcgccctggcgcaggtcgccgatcccggttatcggcggggcgagcgccatcgc
tatctggtggatggtcccctggcggtgttcgatgggcagcggggcggtgcctggcaaacc
ctggccctggggggcgtcggggcgggcggcaagagtttctttgcggtgcgtctgttcgac
gccgtgcacggcaatacgcctggcgccttgtgggaaatcggcgctcctcccgagccggac
cgcaatcatcctttcaatgacctggggtatgcctatgcccgcccacaggtagcgcgcttg
gccgatggtcgctgggcggccttcatcggcaatggctacggcagccattccggggtggca
gcgctgtatgtggtggacctgaatgatggctcgctgattcgcgagatcgccattgacgac
cagcctgacaatggcctgtcgtccgtcaccctcaaggtcaatgcacgcaatgaagtgcag
gcggcctatgcgggcgacctcaaggggcgactgtggaaattcgagctgtccggcaacgat
agcgccagctggcatctggcatttgccgggcagcccttgttccgcaccgcgggaggcgcc
agccagccgatcagcgtaccgccgcgcctgctcgatcatccccgtggtggccaattggtg
ctgttcggtacgggcaagctcaacgagacccgggacaagcaaagccgggcgcgccaggga
ttctatggcgtgtgggacgccgagggcggtcctgggggcattggcgaaagtcagttgcag
gtgcagcaccttgaggccgggttcagcgcggcggccggcagtttcctgcgcagcaccctc
aacgaggtgcgttatccggcgcagcgcggctggtacctgcccctggtacaaggtggcctg
gcagccggcgagcgggtgctcaacgaggcgaccctggtggccggcagggtggtgttcagc
accctgcaactggagcccgacgacccttgttcgagtgccggcagtgggaaattgatcgag
ctggaggcgttcagcggtaagatgctcgacgctgcggtgctcgacaccaatggcgacggg
gtcgtggatgaccaggaccagccctccagcggcgtgcgctacgtcggcaccgtgcccagc
cttggcggagttgccagcaatggcgcccgcaagatcatcagtgactccaggggtggcatc
agcaccctggtggaaaggcccggcggtggcagccggcgcatcctgtggcgacaaatccag
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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