KEGG   Pseudomonas fluorescens UK4: HZ99_00570
Entry
HZ99_00570        CDS       T03319                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
pfn  Pseudomonas fluorescens UK4
Pathway
pfn00250  Alanine, aspartate and glutamate metabolism
pfn00310  Lysine degradation
pfn00350  Tyrosine metabolism
pfn00650  Butanoate metabolism
pfn00760  Nicotinate and nicotinamide metabolism
pfn01100  Metabolic pathways
pfn01120  Microbial metabolism in diverse environments
Module
pfn_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pfn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    HZ99_00570 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    HZ99_00570 (gabD)
   00310 Lysine degradation
    HZ99_00570 (gabD)
   00350 Tyrosine metabolism
    HZ99_00570 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    HZ99_00570 (gabD)
Enzymes [BR:pfn01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     HZ99_00570 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     HZ99_00570 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     HZ99_00570 (gabD)
SSDB
Motif
Pfam: Aldedh
Other DBs
NCBI-ProteinID: AIG00750
UniProt: A0A379IC25
Position
176174..177607
AA seq 477 aa
MSSLIRTGNFIDGQWSSGGASYPVYNPANGELITQVQKAGAEETRLAITAAQRALPAWRS
LTAKERSQRLKRWSELMLGQQRELATLLSREQGKPLAEAMGEVVYAASFLEWFGEEAKRA
YGDVIPSHKADARIIVTKEAIGVVAAITPWNFPLAMVTRKVGPALAAGCTMILKPSEETP
LSAFALGVLAEQAGIPAGVLNIVSGDAPAIGEALQASSVVRKLSFTGSTRTGKLLMRQAA
DTLKKVSLELGGNAPFIVFDDADLDAAVKGAMASKFRNTGQTCVCVNRFFIQDGVYEAFT
AKLAEAVAALRVGSALDGDTEQGPLINAAALAKVEAHVGDALEKGARLLCGGRRHALGGT
FFEPTILTEASGEMLIAQEETFGPVAACFRFKDEAEVLQWANDTPFGLSAYFYSRDIGRV
WRMAEGLEAGMVGINEGIISTEVAPFGGIKESGLGREGSRYGLDDYLEIKYLLMGGL
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagttcgttgatccgtaccggtaatttcattgatggccaatggtccagcggcggcgcc
agctacccggtgtacaacccggccaatggcgagctgatcacccaggtgcaaaaggccggc
gccgaggaaacccgcctggccattaccgccgcccagcgcgcgctgccggcctggcgctca
ctcactgccaaggagcgcagtcagcggctcaagcgctggagcgaactgatgctcggccag
cagcgcgaactggccaccttgctcagccgcgaacagggcaagcccctggccgaagccatg
ggcgaggtggtctatgccgcgagcttcctggagtggttcggcgaggaagccaagcgcgcc
tacggtgacgtgatccccagccataaggctgacgcacggatcatcgtgaccaaggaagcc
atcggcgtggtcgccgcgatcaccccgtggaacttccccctggccatggtcacgcgcaag
gtcggcccggccctggccgccggctgtacgatgatcctcaaaccctctgaagaaaccccg
ctatcggcctttgccctcggggtgctggcggagcaggcgggaattccggccggtgtgctg
aacatcgtgtccggcgatgccccggccatcggcgaagcgctgcaggcttccagtgtggtg
cgcaagctgtcgttcactggctcgacccgcaccggcaagctgctgatgcgccaggccgcc
gacaccctgaaaaaagtctccctggagctggggggcaacgcgccgttcattgtcttcgat
gatgctgacctggatgccgcggtcaagggcgccatggcctcaaagttccgtaacaccggg
cagacctgtgtctgcgtcaaccgcttctttatccaggatggtgtgtacgaagctttcacc
gccaagctggccgaggcggttgccgcgctgcgggtcggcagtgccctggatggcgatacc
gaacagggcccgctgatcaacgcggcggccctggccaaggtcgaggcccatgtcggcgat
gccctggagaagggcgcccggttgctttgcggcggccgtcgccacgccctgggcggcacc
ttcttcgagcccaccatcctcaccgaagccagcggcgaaatgctgatcgctcaggaagaa
acctttggcccggtggcggcgtgttttcgcttcaaggacgaagccgaagtgctgcaatgg
gccaatgacacgcccttcggcctgtcggcctatttctacagtcgtgacatcggccgggtc
tggcgcatggctgaaggcctggaggcgggcatggtgggcatcaacgaagggatcatttcc
accgaagtggcaccctttggcgggatcaaggaatcgggcctgggtcgtgaaggctccagg
tacggcctggacgactacctggagatcaaatacctgctgatgggcggcctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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