KEGG   Pseudomonas fluorescens UK4: HZ99_04360
Entry
HZ99_04360        CDS       T03319                                 
Symbol
rnhA
Name
(GenBank) ribonuclease H
  KO
K03469  ribonuclease HI [EC:3.1.26.4]
Organism
pfn  Pseudomonas fluorescens UK4
Pathway
pfn03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pfn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HZ99_04360 (rnhA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfn03032]
    HZ99_04360 (rnhA)
Enzymes [BR:pfn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     HZ99_04360 (rnhA)
DNA replication proteins [BR:pfn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RNase H
    HZ99_04360 (rnhA)
 Prokaryotic type
   Elongation factors (bacterial)
    RNase H
     HZ99_04360 (rnhA)
   Elongation factors (archaeal)
     HZ99_04360 (rnhA)
SSDB
Motif
Pfam: RNase_H DUF3679
Other DBs
NCBI-ProteinID: AIG01439
UniProt: A0A379IEQ8
Position
complement(1025484..1025936)
AA seq 150 aa
MTDSVELFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELMGAIRGLEELK
RRCDVLLVTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQLLDEQCNRHNITWKW
VRGHIGHPGNERADQLANRGVDEVRGYKQS
NT seq 453 nt   +upstreamnt  +downstreamnt
atgaccgatagcgtagaactctttaccgatggcgcctgcaagggcaatcctggtcccggc
ggctggggcgccttgctggtgtgcaagggcgtggagaaagagttgtggggcggtgaagcc
aacactaccaataaccgcatggaactgatgggcgccattcgcggcctggaagagctcaag
cgccgttgcgatgtgttgttggtgacggactcgcaatacgttatgaaaggcatcaacgag
tggatggtcaactggaaaaagcgcggctggaaaaccgctgccaaggagccggtgaagaac
gccgacctgtggcagttgctggatgaacagtgcaaccgccacaacatcacctggaagtgg
gtgcgcgggcatatcggccatccaggcaacgagcgggccgaccaactggccaatcgtggc
gtggatgaagtgcgcggctacaagcagagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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