KEGG   Pseudomonas fluorescens UK4: HZ99_12135
Entry
HZ99_12135        CDS       T03319                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
pfn  Pseudomonas fluorescens UK4
Pathway
pfn00300  Lysine biosynthesis
pfn00550  Peptidoglycan biosynthesis
pfn01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pfn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HZ99_12135
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HZ99_12135
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pfn01011]
    HZ99_12135
Enzymes [BR:pfn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     HZ99_12135
Peptidoglycan biosynthesis and degradation proteins [BR:pfn01011]
 Precursor biosynthesis
  Amino acid ligase
   HZ99_12135
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: AIG02876
UniProt: A0A379IIX8
Position
complement(2699381..2700844)
AA seq 487 aa
MSLSLNKIFAHAGRDLLIRELSLDSRHVRAGDLFLAVPGGKLDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRQLNLIGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVSALAFDVAVMTNLSRDHLDYHGSMEAYAAAKAKLFAWTDLKCRVVNLDDAFGRQ
LAAEKSESRLISYSLEDSSAYLYCREAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILRVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLVAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEAPSQIFDDIRAGF
KDASLVTFVAGRGTAIAQLIASAGADDVVVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtctcttagcctgaacaagattttcgcccacgctggccgcgacctgttgattcgcgaa
ctgagtttggacagccgccatgtacgtgccggcgacctgttcctggccgtgccgggcggc
aagctcgatggccgtgcccatatcgccgacgccttgcagcgcggcgcagcggctgtggct
tatgaggtggaaggcgccaccgtattgccgatcaccgatgtgccgttgattccggtcaag
ggcctggcagcgcagctgtcggatatcgccgggcgcttttatggcgacccgagccgccag
ctcaacctgattggcgtcaccggtaccaacggcaagaccagcgttacccaattggtggcc
caggcgctggacctgctgggtcagcactgcggtatcgtcggtaccctgggcaccggtttc
tacggcgcgctgcaaagcggcttgcacaccacgccaaacccgattgccgtgcaggcgacc
ctggccgacttgaaaaaggccggggccaaggccgtcgccatggaggtgtcgtcccacggt
ctggaccaggggcgggtgagcgccctggcgtttgacgtggcagtgatgaccaacctgtcc
cgcgatcacctggactaccacggcagtatggaggcgtacgccgccgccaaggccaagctg
tttgcctggaccgacctgaaatgccgggtggtgaacctggacgatgcattcggtcgccaa
ctggccgcagaaaaaagcgaatcgcgcctgatcagctacagcctggaagattccagcgcc
tacctgtattgccgcgaagcccagttcaacgatgagggtgtgcgcgccacgctggtgacg
cctcaaggcgaacaccatttgcgcagcaccttgctcggtcgcttcaacctgagcaacgta
ctggcggccgtcggtgccttgctgggcctggactacgcactggatgaaatcctgcgcgtg
ctgcccaagctcgaaggcccggctgggcgcatgcagcgcctgggtggcgggacgcagccg
ctggtggtggtcgactatgcccataccccggatgccctggagaaggtgctcgtagctctt
cgtccccacgccaagggtaagttgctgtgcctgttcggctgcggcggcgatcgtgatcgc
ggcaagcgcccgctgatggccgagatcgtcgagcgcctggccgacggcgtgctggtcacc
gacgacaatccgcgcagcgaagcaccgagccagattttcgacgatattcgcgcaggcttc
aaagacgcctccctggtgacctttgttgccgggcgtggcacggccattgcccaattgatc
gccagcgccggtgctgatgatgtggtagtcctggccggcaaaggccatgaggactatcag
gaaatcaacggcgagcgccatgccttctcagatctggtcgaggccgatcacgcgttgact
gcatgggaggtggcccatgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system