KEGG   Pseudomonas fluorescens UK4: HZ99_16740
Entry
HZ99_16740        CDS       T03319                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pfn  Pseudomonas fluorescens UK4
Pathway
pfn00300  Lysine biosynthesis
pfn00470  D-Amino acid metabolism
pfn01100  Metabolic pathways
pfn01110  Biosynthesis of secondary metabolites
pfn01120  Microbial metabolism in diverse environments
pfn01230  Biosynthesis of amino acids
Module
pfn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HZ99_16740
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HZ99_16740
Enzymes [BR:pfn01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HZ99_16740
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AIG03738
UniProt: A0A379ILF9
Position
3644829..3646076
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIQAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKSREDMRRALEVGVH
CFNIESTDELERLQGVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEYKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRDSEARAYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgctgtccgcg
attgccgaacgcttcggtaccccgacctacgtgtactcgcgagcgcatatccaggcgcag
taccgctcctttaccgacgcgctcgacggcgtaccgcacctggtgtgctatgcggtcaag
gccaactccaacctcggcgtgctcaatgtcctggcgcgcctcggtgctggctttgacatc
gtgtcccgtggcgagctggagcgtgtcctggccgctggcggccaggctgacaagatcgtg
ttctcgggtgtcggcaagagccgcgaagacatgcgccgtgccctggaagtaggcgtgcat
tgcttcaacatcgaatccactgacgagctcgagcgcctgcaaggggtggctgccgagatg
ggcgtgcgtgcgccgatctccctgcgcgtcaacccggacgtcgatgctggcacccacccg
tacatttctaccggtctcaaagagaacaagttcggtatcgccattgccgacgccgaagac
gtgtacatccgcgccgcccaactgccgaacctggaagtgctgggtgtcgactgtcacatc
ggctcgcagctgaccaccctgccaccgttcctggatgcccttgaccgcctgctggccctg
atcgaccgtctcggcgaatgcggcatctacctgcatcacatcgatctcggtggtggcgtg
ggcgtgcgttatcgcgatgaagagccaccgctgattgccgactacatccaggccgtgcgc
gagcgcatcgaaggccgcgacctgacgctgatgttcgagccgggccgctatattgtcgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgaatacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcgtggatg
aacgtcaccgccgtgacgcctcgtgacagcgaagcgcgcgcctatgacatcgttggcccg
atctgcgaaaccggcgacttcctggccaaggaccgtgaactggccctggaagaaggcgat
ctgctggccgtgcattcggccggtgcctatgggtttgtcatgagttccaactacaacacc
cgcggacgtaccgccgaagtgttggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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