KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_1388
Entry
Pfl01_1388        CDS       T00283                                 
Name
(GenBank) putative ribonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pfo  Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:pfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pfo03016]
    Pfl01_1388
Enzymes [BR:pfo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Pfl01_1388
Transfer RNA biogenesis [BR:pfo03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Pfl01_1388
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: ABA73131
UniProt: Q3KGH5
Position
1561967..1563100
AA seq 377 aa
MAIDIHWIRDNDSLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPL
TINAWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLSDDKFAWV
LEDGAELVANLRRETDPYEVYREAKLAWKLSRAQLAVLRELCAWREREARARDLPRNRIV
REHSLWPLARTQPDNLSALGKIEDMHPRTVRQDGEFLLDLIKRSGSVGPDQWPPAVPEPL
PIEAAALIKQLRALGQAEAERLGIAPELMLRKKTLEALVKSGFPEGPYQLPDSLRGWRRE
LMGQKLLDSLATAGEQP
NT seq 1134 nt   +upstreamnt  +downstreamnt
gtggccatcgatattcactggattcgcgacaacgatagcctcgcgcagttttgcgccgag
tggcagcagctgccgttcgttgccctcgacaccgaattcatgcgggtcgacaccttctat
ccgattgccggcctgttgcaggtcggcgacggcaaacgcgcctacctgatcgacccgctg
accatcaacgcctggcagcccttggccgcgttgctggaaaacccggcggtgctcaaagtc
ctgcacgcctgcagcgaagacctcgaagtcctgctgcgcctgaccggcagcctgccggcg
ccgctgttcgacacccaactggccgctgcctacctgaacctcgggttctcgatgggctat
tcgcgtctggtgcaggaagtgctgggcatcgaactgccgaagggcgaaacccggtccgac
tggttgcagcgtccgttgtccgacacgcaaatcagctatgccgccgaagacgccgtgcat
ctggcggaggttttcgtacaactgcgtccgaaactgtccgacgacaaattcgcctgggtg
ctggaggacggcgccgaactggtcgccaacctgcgccgcgagaccgatccgtacgaggtg
tatcgcgaggccaaactggcgtggaagctgtctcgcgcccaactggctgtgctgcgcgaa
ttgtgcgcctggcgtgagcgcgaggcccgcgcccgcgacctgccgcgcaatcgcatcgtg
cgtgaacactcgctgtggccgctggcccggacccaaccggacaacctcagcgcgctgggc
aagatcgaagacatgcacccgcgtaccgtgcgtcaggacggcgagtttctgcttgatctg
atcaagcgctctggcagtgtggggcctgatcaatggccgccagccgtgccggagccgttg
ccgatcgaagccgccgcgctgatcaaacagctgcgggcgctcggtcaggccgaagccgaa
cgtctgggcatcgcgccggaactgatgctgcgcaagaaaaccctcgaagcgctggtcaaa
agcggcttccccgagggcccttaccaattgcctgattcgctgcgtggctggcgccgcgaa
ttgatgggccagaagctgctcgacagcctggccaccgccggagaacagccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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