KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_3879Help
Entry
Pfl01_3879        CDS       T00283                                 

Gene name
fadB
Definition
(GenBank) fatty oxidation complex alpha subunit
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
pfo  Pseudomonas fluorescens Pf0-1
Pathway
pfo00071  Fatty acid degradation
pfo00280  Valine, leucine and isoleucine degradation
pfo00281  Geraniol degradation
pfo00310  Lysine degradation
pfo00362  Benzoate degradation
pfo00380  Tryptophan metabolism
pfo00410  beta-Alanine metabolism
pfo00640  Propanoate metabolism
pfo00650  Butanoate metabolism
pfo00903  Limonene and pinene degradation
pfo00930  Caprolactam degradation
pfo01040  Biosynthesis of unsaturated fatty acids
pfo01100  Metabolic pathways
pfo01110  Biosynthesis of secondary metabolites
pfo01120  Microbial metabolism in diverse environments
pfo01130  Biosynthesis of antibiotics
pfo01200  Carbon metabolism
pfo01212  Fatty acid metabolism
Module
pfo_M00087  beta-Oxidation
Brite
KEGG Orthology (KO) [BR:pfo00001]
 Metabolism
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Pfl01_3879 (fadB)
   00650 Butanoate metabolism
    Pfl01_3879 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Pfl01_3879 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Pfl01_3879 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Pfl01_3879 (fadB)
   00310 Lysine degradation
    Pfl01_3879 (fadB)
   00380 Tryptophan metabolism
    Pfl01_3879 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Pfl01_3879 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Pfl01_3879 (fadB)
   00281 Geraniol degradation
    Pfl01_3879 (fadB)
  Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    Pfl01_3879 (fadB)
   00930 Caprolactam degradation
    Pfl01_3879 (fadB)
Enzymes [BR:pfo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Pfl01_3879 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Pfl01_3879 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Pfl01_3879 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     Pfl01_3879 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2
Motif
Other DBs
NCBI-ProteinID: ABA75616
UniProt: Q3K9D8
Position
complement(4384990..4387137)
Genome map
AA seq 715 aa AA seqDB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKLRLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgttccgaccgtcgccgcgatcaatggcatcgctttgggcggggggctggaa
atgtgcctggcagcggactaccgcgtcatgtcgaccaaggccaagatcggtctgccggaa
gtcaagctgggcatctaccctggcttcggcggcaccgtgcgtctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtcctgaagacgcgctg
aaagtcggcgccgtcgatgccgtggttgcccctgaaaaactgcaggatgccgcccttgag
ctgatcaagcgcgccgtctccggcgagttcgattacaaggccaagcgtcagcctaagctg
gaaaagctcaggctgaacgccattgaacaaatgatggctttcgaaaccgccaaaggtttc
gtggctggccaggctggcccgaactacccggccccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtcgaagccgcaggtttcgtgaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactg
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcttccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcaaggtctggctgaagccgccaagctg
ctggtcggtcgcgttgataaaggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggtgatttcggtcacgtcgacctggtcgttgaagcc
gtggtcgagaatccgaaggtcaagcaagccgttctggcggaagtcgaagacaaggtcaaa
gaggacaccatcctcgcgtccaacacttcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccatcgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaaactggtcagtgccggtgtggac
ttcgtccgtatcgacaagatcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgtgacgtgatggctgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcggccatcgacgtgctttacgaagccaagcgt
ctcggtcagaagaacggcaagggcttctatgcctacgaggccgacaagaagggcaagcag
aagaaagtcgccgatccgtcggtactggaagtgctcaagccgatcgtctacgagcagcgc
gaagtcactgacgaggacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgactcgatcggtgtt
gccgagttcgttgccctggccgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaaaaacggccagagcttcttcggttaa

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