KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_5519
Entry
Pfl01_5519        CDS       T00283                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
pfo  Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:pfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfo03400]
    Pfl01_5519 (rep)
Enzymes [BR:pfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pfl01_5519 (rep)
DNA repair and recombination proteins [BR:pfo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pfl01_5519 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 DUF287 DEAD
Other DBs
NCBI-ProteinID: ABA77256
UniProt: Q3K4P8
Position
6187561..6189570
AA seq 669 aa
MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAHLIQNCGIRAQYIVAMTFTNKA
AREMKERVGTLLRPGEGRGLTVCTFHNLGLNIIRKEHERLGYKPGFSIFDETDVKSLMTD
IMQKEYAGDDGVDEIKNMIGAWKNDLILPAQALENARNPKEQTAAIVYTHYQRTLKAFNA
VDFDDLILLPVKLFEEHADILEKWQNKVRYLLVDEYQDTNASQYLLVKMLIGKRNQFTVV
GDDDQSIYAWRGARPENLMLLKDDYPSLKVVMLEQNYRSTSRILRCANVLISNNPHEFEK
QLWSEMGHGDEIRVIRCRNEDAEAERVAMEILSLHLRTDRPYSDFAILYRGNYQAKLIEL
KLQHHQVPYRLSGGNSFFGRQEVKDLMAYFRLIVNPDDDNAFLRVINVPRREIGSTTLEK
LGNYATERKISMYAATDELGLGEHLDSRFTDRLSRFKRFMDKVREQCAGEDPISALRSMV
MDIDYENWLRTNSSSDKAADYRMSNVWFLIEALKNTLEKDEDGEMTVEDAIGKLVLRDML
ERQQEEEEGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSIEADTIEEERRLAYVG
ITRARQTLAFTFAAKRKQYGEIIDCAPSRFLDELPPDDLAWEGNDDTPTEVKAVRGNSAL
ADIRAMLKR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcccgactcaatccccggcagcaagaagccgtgaactacgtcggcggccctctattg
gtgctcgccggtgctggctccggcaagaccagcgtgatcacgcgcaagattgcgcatctg
atccagaactgcggcatccgcgcccagtacatcgtcgccatgaccttcaccaacaaggcc
gcgcgcgagatgaaggagcgggtcggcaccctgctgcgtccaggtgaaggacgcgggctg
acggtctgcaccttccacaacctgggcctgaacatcatccgcaaggaacatgaacggctg
ggctacaaacccggtttctcgatcttcgacgaaaccgacgtcaagtcgctgatgaccgac
atcatgcagaaggaatatgcaggcgacgacggcgtcgacgagatcaagaacatgatcggc
gcctggaaaaacgacctgattctgccggcccaggccctggaaaacgcccgcaaccccaag
gaacagaccgccgccatcgtctacacccactaccagcgcacgctcaaggcgttcaacgcg
gtggacttcgacgacctgatcctgctgccggtgaaactcttcgaagagcacgccgacatc
ctcgaaaagtggcagaacaaggtgcgttacctgctggtcgacgaataccaggacaccaac
gccagccagtacctgctggtgaaaatgctcatcggcaaacgcaaccagttcaccgtggtg
ggcgacgacgaccagtcgatctatgcctggcgcggcgcgcggccggaaaacctgatgctg
ctcaaggacgactatccgtccctgaaagtggtgatgctcgagcagaactaccgctccacc
agccgcatcctgcgctgcgccaacgtgctgatctcgaacaacccgcacgaattcgaaaaa
cagctgtggagtgagatgggccacggcgacgaaatccgcgtgatccgctgccgcaacgag
gacgccgaagccgagcgcgtggccatggaaatcctcagcctgcacttgcgcaccgaccgc
ccgtacagcgatttcgcgatcctctatcgcggcaactaccaggccaagctgatcgagctg
aaactgcagcaccatcaggtgccgtaccgtttgagcggcggcaacagcttcttcggccgt
caggaagtgaaagacctgatggcctacttccgcctgatcgtgaacccggacgacgacaac
gccttcctgcgggtgatcaacgtgccgcgccgagaaatcggctcgacgaccctggaaaaa
ctcggcaactatgccaccgaacgcaagatctcgatgtacgccgccaccgatgaactcggc
ctgggcgagcatctggacagccgcttcaccgaccgcctgtcgcgcttcaagcgcttcatg
gacaaggtgcgcgagcagtgcgccggcgaagacccgatctccgccctgcgcagcatggtc
atggacatcgactacgagaactggctgcgcaccaacagttccagcgacaaggccgcggac
taccggatgagcaacgtctggttcctgatcgaagccttgaagaacaccctggaaaaagac
gaagacggcgaaatgaccgtcgaggacgccatcggcaaactcgtcctgcgtgacatgctg
gaacgtcagcaggaagaggaagagggtgccgaaggcgtgcagatgatgaccctgcatgcg
tccaagggcctggaattcccttacgtgttcatcatgggcatggaagaggaaatcctcccg
caccgctccagcatcgaagccgacaccatcgaagaagaacgccgcctggcttacgtgggc
atcacccgcgcgcgccagaccctggcgtttaccttcgccgccaagcgcaaacagtacggc
gagatcatcgattgcgcgccaagccgcttcctcgatgaactgccgccggacgacctggcc
tgggaaggcaacgacgacacaccgaccgaagtcaaagccgtgcggggcaacagcgcactg
gctgatatacgcgcgatgttaaagcgctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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