KEGG   Pseudozyma flocculosa: PFL1_04534
Entry
PFL1_04534        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PFL1_04534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_04534
Enzymes [BR:pfp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     PFL1_04534
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PFL1_04534
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 19318635
NCBI-ProteinID: XP_007880251
UniProt: A0A061H5Q4
Position
Unknown
AA seq 523 aa
MDSPDTPPPRLPAHFAHSYAYTLPASPSPSPSPSARAPRRSPRKPVPTVPYASLVAPSSS
PEPHARSSAASTSRTRSHSADPSASASPSKKRKRIKRTVDDPASAEGSKYAQYHGVPDHI
SPRNHVLLCGINPGLTSSALQHHFAGPTNHFYPVLHQSGLTSRRFRPDEDHTFPTLRPFS
LGLTNIGQRPTVEASELPRHEMDAGVPVFLRKVDRWRPRTVAFVGKGIAEVVSKCLKRCP
PGHDGSEGAARITLDIPTSMLLAFDPDAAAQGARGSRTKSTRNKGETPPKRKSVKKDDVK
DDSGYGLLPFVFVHRRQGASSNTDTVVADPSRPLVDIANIKVESNATSGDAIKVEEGRSS
RDPCAAVLNRDTTSLPAQPSSTTDTDVAGEGDVYDDLTFFFVSPSTSARVTTHFLNDKAQ
ILRHLARFLEFLSRRHRRRAGASASDDIKVEPDVEDDETRRVEFRCIDLDTLTFLEARSV
PLLPAATTAKVEEKREEEEDVDVDELIDDDDDDDDNGGIASPS
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggactcgccagacacaccaccgcccaggctacccgcccactttgcgcattcctacgcc
tacacgctacccgcctcgccctcaccttcgccttcgccctcagcccgcgcaccacgacgc
agcccacgcaaacccgtccccaccgtcccctacgcctccctcgtcgcaccgtcgtcgtcc
ccagagccacatgcgcgctcctcggcagcctctacctctcgaacccgctcgcactctgcc
gatccatccgcctccgcttcgccctcaaagaagaggaaacgcatcaagcgcacagtcgac
gaccccgcatctgcagagggaagcaagtacgcccagtaccatggcgtgccggaccacatc
tcgccgcgcaaccacgtcctgctgtgcggcatcaaccccggtctgacctcgtcggcgctc
caacaccactttgcagggcccacaaaccacttctaccccgtcctacaccagtccggcctc
acctcgcgccgcttcaggcccgacgaggaccacaccttccccaccctccgccccttttcc
ctcggcctgaccaacatcggccagcgccccacggtagaggcgtcggagctgccccgacac
gagatggacgccggcgtgcccgtatttctccgcaaagtggaccggtggcggccgcgcacc
gtcgcctttgtcggcaagggcatcgcagaggtcgtgtccaagtgcctcaagcgctgtccc
cccggccatgatggaagtgagggggcggcgaggatcacgttggatatccccacatctatg
ttgctcgctttcgatcccgatgccgccgcacaaggcgccagggggagcaggacaaagtcg
acgaggaacaagggcgagacgccgcccaagaggaagagcgtaaagaaggacgacgtcaag
gacgacagcgggtacggcctcctgccctttgtctttgtccaccgtcgtcaaggagcatcc
tccaacaccgacaccgtcgtcgcagatccatcacgacctctcgtcgacatcgccaacatc
aaggtggagtctaacgccacctctggcgatgcgatcaaggtcgaagagggacgctcgagt
cgagacccttgcgccgccgtcctgaatcgcgatacgacctctcttcccgcccaaccctcg
tcgacgacagacaccgacgtcgccggggagggggacgtgtacgacgatctgacttttttc
ttcgtatccccctcgacttcggcgcgggtcacgacccactttctgaacgacaaggcccag
atactgcgtcaccttgctcgcttcctcgagttcctctcccgtcgtcatcgtcgtcgtgcc
ggcgcatccgcatccgacgacatcaaggtagaacccgacgtggaagacgacgagacgaga
cgcgtcgagttccgatgcatcgacctcgatacgctcacctttctcgaggcacgtagcgtc
ccgttgcttcccgccgccacgacggccaaggtggaagagaaaagggaggaggaggaggac
gtggatgtggatgaattgatcgacgatgacgacgacgacgacgacaacgggggcatcgct
tcgccttcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (54)   

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