KEGG   Pseudozyma flocculosa: PFL1_05292
Entry
PFL1_05292        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp04111  Cell cycle - yeast
pfp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PFL1_05292
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PFL1_05292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pfp04121]
    PFL1_05292
Ubiquitin system [BR:pfp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     PFL1_05292
SSDB
Motif
Pfam: WD40 F-box-like NBCH_WD40 ANAPC4_WD40 F-box WD40_like PQQ_3 F-box_4
Other DBs
NCBI-GeneID: 19319386
NCBI-ProteinID: XP_007881016
UniProt: A0A061H3F9
Position
Unknown
AA seq 1076 aa
MSAGSPPPRAISPPTPAPSPQPELHAHLRLASALSQHHVGPGASNGQPQSSRAASQLSFD
PNDPQPLLKHLSIVLPQLSSSARHRFLTGLVDLFDLRELAHLSSELGPRLKVDFLSSLPI
EVSLHILSFIDDPKTLARASRVSRFWRSLVNDEHTWKAMCLKHRYRRRASSSAGISILDD
RLQPHHPHGTAATTPRFAPPSSRLMPLSEATADGEAEAEADYDDDDDDDDSTVLASLYQR
YRARGLDPSNALHELRTLHDLFLSKQDDGGGNLADQMSDADKAFYAQLEEIVAEESRERY
GDGRATAARSDAAETQGMDEDDEQLPQPSASTQAITSSSRRGSSNVFGSANAAGQPDDHP
SASSSSSSSSSNLGWLGAGPSAAGAASSTSAGAAANAARISAPAHAISSAYRTPSGRLDR
LRNWQDPRASGSAGPAASGSQTSTSGATGLGLGLSSAVEVGQASSAVSADDTEMAAVDAG
SSAAPPIQTPSLDPLPRSPNPLTAALRQGLPQIPAYDSPTNRFSTSQSSAEASGSGSGSG
SRSSRHDLLVPGRTAAMATPTAPRLDGSWPQAAGGGSAIEDGQGGANPVASTSGQHDPSS
SKKARRRSAPAVDAHGQPLGLGRPYEASADSLRSATLGHAGEYDGAQQQQQQQQQRPFSY
RTHFKLAYLTESNWMRGGRFQTKHESSDAGAVVTSLAIDSEWIVVGMANSKIHVFDAETG
LYSQTLLGHESGVWCLTLVSRTGKKRRAASGKPTMVVPSYVADEIERNRSGAGQAGRGAM
PSMAELGGNAVGLGNPCGSVGGYGNEDAIVVSGGCDRDVRVWDLGTGECRYVLSGHTSTT
RCLKVLEGRPIAVSGSRDSTLRVWDIARGEHVHLLAGHQHSVRCMEVAGNRVASGSYDCN
CRVWDVDTGECLRLLRGHIHQIYAVAFDGERVATGSLDSTVRVWSVSSGECVALFQGHTS
LVGQLQLTDKMLVTGGSDGRVIVFSLETFECVHRLCAHDNSVTCLQFDERYIITGGNDGR
VKLWDFATGRYIRDVCEPCEQVWKVSYYNDQVVVLCKRGERTCMDVISFRPTVDEF
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgagcgcaggctcgccaccgcccagggccatcagcccgcccacaccagctccatcgccc
cagccagagctccacgcccacctccgcctcgcctccgcactctcccagcaccatgtcggt
cccggcgccagcaacggccaaccacaatcctcgagggcagcctcgcagctctcctttgac
ccaaacgacccgcagcctctcctcaagcacctctccatcgtcctgccccagctctcctcg
tccgcccgccaccgcttcctcaccggcctcgtcgacctctttgacctccgcgagctcgcc
cacctctcgtccgagctcggcccgcgcctcaaggtcgacttcctcagctccctccccatc
gaggtcagcctgcacatcctcagcttcatcgacgacccaaagacgctcgcacgcgcgagc
cgcgtcagccgcttctggcgcagcctcgtaaacgacgagcacacctggaaggccatgtgc
ctcaagcatcgctaccgccggcgcgccagcagctccgccggcatcagcatcctcgatgac
cgactccagccccaccacccgcacggcaccgccgcgaccacgcctcgattcgccccgccc
tcgtcccgcctcatgcccctgtccgaagccaccgccgacggcgaggccgaggccgaggcc
gactacgacgacgacgacgacgacgacgacagcaccgtcctcgcctcgctctaccagcgc
taccgcgccaggggactcgacccttcgaatgcgctccacgagctccgcaccctccacgac
ctcttcctcagcaagcaggacgacggcggcggcaacctcgccgaccagatgagcgatgcc
gacaaggccttctacgcccagctcgaggagattgtcgccgaagaaagccgagagcggtac
ggcgacggtagggcgacggcggcccgcagcgatgctgccgaaacgcagggcatggacgag
gacgacgagcaactgccgcagccatccgcctccacgcaggccatcaccagcagcagcagg
cgcggcagcagcaacgtcttcggttcggcaaatgccgccggacaacccgacgaccacccg
agtgcatcgtcgtcgtcgtcgtcgtcgtcgtcgaacctcggctggcttggtgctgggcct
tcagctgccggcgccgcctcgagcaccagtgctggcgccgccgccaatgccgcacgcatc
tcggcaccggcccacgccatcagcagcgcctaccgcacgccctcgggccgcctcgaccgc
ctccgtaactggcaagatccgcgcgccagtggctcggcgggccccgccgcatccggctcg
cagacctcgacgtcgggcgccacgggcctcggcctcggcctgtcctctgccgtcgaagtg
ggccaggcctcttccgccgtatccgccgacgacaccgagatggcggccgtcgacgccggc
tcctctgccgcaccgcccatccagacgccgtcgctggacccgctgccacgttcgcccaac
ccgctcaccgccgcccttcgccaggggctgccccagattccggcctacgactcgccgacg
aaccgcttctctacctcccagtcttccgccgaggcgagtggcagtggcagcggcagtggc
agtcgctcgtcgcgtcacgatctgctcgtgccaggtaggacggccgccatggccacgccg
acggcgcccaggctggacggctcatggccccaggctgctggcggcggcagcgcgatcgag
gacggccagggcggcgccaatccggtcgcgtcgacatcaggccagcacgatcccagctcg
agcaaaaaggcgcgccgccgctcggcaccggccgtcgatgcccacgggcagccgctcggc
cttggacggccctatgaggcctccgccgactcgctgcggtctgccacgctgggacatgcc
ggcgagtacgatggcgcgcagcagcagcagcagcagcagcagcagcggccgttctcgtac
cgcacccacttcaagctggcctatctgacggagtccaactggatgcgaggcgggcgcttt
cagaccaagcacgagtcgtcggacgcgggcgccgtcgtgacgagcctggccatcgacagc
gagtggatcgtggtgggcatggccaactccaagatccacgtcttcgacgccgagaccggc
ctctactcgcagacgctgctgggccacgagagcggcgtctggtgcctcacgctcgtcagc
cgcacgggcaagaagcggcgggcggcgtcgggcaagccgacgatggtcgtgccgtcgtac
gtggccgacgagattgagcgcaaccggagcggtgcgggccaagccgggcgcggtgcgatg
ccgtcgatggccgagctcgggggcaacgccgtcgggctgggcaacccgtgcggcagcgtc
gggggctacggcaacgaggacgccatcgtggtgagcggcggctgcgatcgcgacgtgcgg
gtgtgggacctgggcacgggcgagtgccggtacgtgctgtccgggcacacgtcgacgacg
cggtgcctcaaggtgctcgaggggcgaccgattgccgtgtcgggcagccgcgactctacg
ctgcgggtgtgggacattgcgcggggcgagcacgtgcacctgctggcgggccaccagcac
agcgtgaggtgcatggaggtggcgggcaaccgggtggcgtcgggcagctacgactgcaac
tgccgggtgtgggacgtcgacacgggcgagtgcctgcggctgctgcggggccacatccac
cagatctacgccgtcgctttcgacggggagcgggttgcgacgggctcgctcgactcgacg
gtgcgggtgtggtcggtgtcttcgggcgagtgcgttgcgctgttccagggccacacgtcg
ctcgtggggcagctgcagctgacggacaagatgctcgtcacgggcggctccgacgggcgc
gtcatcgtcttttcgctcgagacgtttgagtgcgtgcaccggctgtgcgcgcacgacaac
tcggtcacctgcctgcagtttgacgagcgctacattatcacgggcggcaacgacgggcgg
gtcaagctgtgggacttcgccacgggccgctacatccgcgacgtgtgcgagccgtgcgag
caggtgtggaaggtgagctactacaacgaccaggtcgtggtgctctgcaagcgcggcgag
cgcacctgcatggacgtcatctcgtttcgccccacggtcgatgagttttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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