KEGG   Pseudozyma flocculosa: PFL1_05639
Entry
PFL1_05639        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03082  ATP-dependent chromatin remodeling
pfp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PFL1_05639
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    PFL1_05639
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pfp01009]
    PFL1_05639
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_05639
   03036 Chromosome and associated proteins [BR:pfp03036]
    PFL1_05639
Protein phosphatases and associated proteins [BR:pfp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     PFL1_05639
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     PFL1_05639
    SWI/SNF complex
     PFL1_05639
Chromosome and associated proteins [BR:pfp03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    PFL1_05639
   PBAF complex
    PFL1_05639
   SWI/SNF complex
    PFL1_05639
SSDB
Motif
Pfam: SNF5 GATA
Other DBs
NCBI-GeneID: 19319726
NCBI-ProteinID: XP_007881366
UniProt: A0A061H303
Position
Unknown
AA seq 974 aa
MAAMAAMAKQGRRPSMVVDPNTGASPGVAGRRPSTVELSQANLVNPAFENLPLTDPTLAA
AGAAPTQTPAMAHAMNQGMLGGFGQPSAPSTPRRPSQQQVAQVATAGVASGGPIMAPAAP
TATPGAAAAAQQQPPLSQPPAQAPAAAQPDLSHLPMVQGGPPPRESAVGLPINGYNTRVT
KLPSSGAASQQKGGPDGGDGQSSKEAAGDKDGAAEVPAWMPLTAEQEEELLAFMQRDKEY
ESLYRKQQSNMEKSIKERIDAVKPPRRKVSDGTLTKPKPLAWWERAEEEDFSGLNRDGLF
EPFRILLPSQKRLELEQGQRGSRPTIALDKAKVAAVSALEEDLVPIRLEIDHEHWKLRDT
FTWNALDSHIDLDAFAMSICEDIGLPAAVFVPAIKEQINAQIQDHLATNAVRPRKNRTAS
AGSGKAGTEGVLDGKDLQWWTRWRRTLDEGPQAARKRKRASTSITAARGMASQPAAGIPA
DGADGADMQVDGESQRVEVVDSDRDGGNGKGGDGDDEAEMPDVSNVTPAEELRMVIKLDI
TVGSMNLVDQFEWDAGETDPTAAETFAEAFAADLGLPGEFRTAIAHSIREQHPNIHDGMW
HCSNCGIPGTLAPGRRKGPLGDKSLCGPCGKYYHRHRKVIMLDYTRDLAHHMKQQQSGQA
QRKASVPSILLDSALLSSLGDQDDSTEPNSAGDTPRADLGDASVGGGDGDGNSNDNALGV
VRKTGSRSRTPRAASPDLPFELVGSPDDSDSSSRSESPEPVATRKSSARDAYQERAGAKP
PAEHRDERSGGGEEGELEEQGEIKGSDPAKTAPPNAATSLASAPAAAAAASASPSSMPSV
KVPTTGVKGQPLTPAEWLLQSAATLRARYPNDRFEIQPRPVPAHLPTPAVPEWRVRCLDC
PGKLYTPGPGESLNNFEIHLRNRQHRANVNSRVYGGAAGSPPPGAGSVGTPGSARSPSMS
SAAAPAVGGTPGRP
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggctgccatggcggcgatggccaagcagggaaggcggccttcgatggtcgttgacccc
aacacgggcgctagccccggcgttgccgggcgcagaccctccaccgtggaactctctcag
gccaacctggtcaaccctgcctttgagaatctgccgctgaccgatccgacgctggcggcc
gccggtgctgcgccgacgcagacgccggccatggcgcacgccatgaaccagggcatgctg
ggcgggtttggccagccttcggcgccgtcgacaccgcggcgacccagccaacagcaggta
gcgcaggtggccaccgctggcgtcgcctccggtggtccgatcatggctcccgctgctcct
acggcaacaccaggtgctgcggcggcggcgcagcagcagccaccgctctcgcagccgccg
gcgcaagcccctgccgccgcgcaacccgatctttcccaccttccgatggtgcagggcggc
ccgcctccgcgcgaatcggcggtgggactgcccatcaatggttacaacacacgcgtcacc
aagctaccttcctcgggtgcggcctcgcagcagaagggcgggccggacggtggagacgga
cagagttccaaggaggcggcaggcgacaaggacggcgccgccgaagtcccggcctggatg
ccgcttaccgccgagcaggaagaggagctgctcgcctttatgcagcgcgacaaggagtac
gagtcgctctaccgcaagcagcagtcgaacatggagaagagcatcaaggagcgcatcgac
gccgtcaagccgccccgcaggaaggtgtcggacggcacactgaccaagcccaagccgctg
gcgtggtgggagagggccgaggaagaggacttcagcgggcttaaccgcgacggcctcttc
gagccgttccgcatcctcttgccttcgcagaagcgcctcgagctcgagcagggccagcgc
ggctcgcggcccacgattgcgctcgacaaggccaaggtggccgccgtctcggcgctcgag
gaagacctcgtgccgatccggctcgagattgaccacgagcactggaagctccgcgacacc
ttcacctggaacgcgctcgactcgcacatcgacctcgacgcctttgcgatgtcgatctgc
gaggacatcggcctgccggcagccgtcttcgtgccggcgatcaaggagcagatcaacgcg
cagatccaggaccaccttgccaccaatgcggtacgaccccgcaagaaccgcacggcgtcg
gccggcagcggcaaggccggtaccgagggcgtgctcgacggcaaggacctgcagtggtgg
acgagatggcgccggacgctcgacgaaggcccgcaggcggcgaggaagcggaagcgcgcc
agcacctcgatcacggctgcgcgtggtatggccagccagcctgctgcgggcatcccggcc
gacggtgctgacggcgcggacatgcaggtggacggcgagtcccagcgagtcgaggtcgtc
gacagcgacagggacggaggcaatggtaagggcggggacggagatgacgaggccgagatg
cccgacgtcagcaacgtgacgccagccgaagagctgcgcatggtcatcaagctcgacatc
accgtcggcagcatgaacctggtcgaccagtttgagtgggacgccggcgagacggatccg
accgcagccgaaacgtttgcagaagccttcgcggcagacctcggcctgcccggcgaattc
cggacggccatcgcccactcgatccgcgagcagcaccccaacatccacgacggcatgtgg
cattgctccaactgcggcatcccgggaacgctggctcccggacgccgcaagggcccgctg
ggcgacaagtcgctgtgcggaccgtgcggcaagtactaccaccgccaccgaaaggtcatc
atgctcgactacacgcgtgaccttgcccaccacatgaagcagcagcagagcggccaggcg
cagcgcaaggccagcgtgcccagcatcttgctcgacagtgcgctcctctcgtcgctcggc
gaccaggacgactcgaccgagcccaactcggcgggcgacacgccccgggccgatctcggc
gatgcctctgtgggcggcggcgacggcgacggcaacagcaacgacaacgcgctgggcgtg
gtccggaagacgggctcgcggtcccgcacgccgcgcgccgcatcgcccgacctgccgttt
gagctggtcggcagcccagacgacagcgactcgtcgtcgcgctccgagagcccggagcct
gtggcgacgcgcaagtcgtcggcgcgcgacgcctaccaagaacgagcgggtgccaagccg
cctgccgagcaccgcgacgagcggagcggcgggggcgaggagggcgagctggaagagcag
ggcgagatcaaggggtccgacccggccaagacggcgccgccgaacgccgcaaccagcttg
gcctcggcgcctgccgctgcagcggccgcctcggcgagcccgtcgtcgatgccgagcgtc
aaggtgcccacgactggcgtcaaggggcagccgctgacgccggccgagtggctgctgcag
tcggcggcgacgctgcgcgccagataccccaacgatcgtttcgagatccagccgcgtccc
gtgcccgcccatctgcccacgccggcggtgcccgagtggcgggtgcgctgcctcgactgt
cccggcaagctctacacgcctggtcctggtgaatcgctcaacaactttgagatccatctg
cgcaaccggcagcatcgggccaatgtcaacagcagggtgtatggcggcgcggcgggctct
ccgccgcctggcgccggctcggtgggcacgccgggctcggcaaggagcccgtcgatgtcg
tcggccgcagcgcctgccgttgggggtacgcccggccgtccttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

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