KEGG   Pseudomonas fluorescens SBW25: PFLU_1651
Entry
PFLU_1651         CDS       T00899                                 
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta (IHF-beta)
  KO
K05788  integration host factor subunit beta
Organism
pfs  Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:pfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfs03032]
    PFLU_1651 (ihfB)
   03036 Chromosome and associated proteins [BR:pfs03036]
    PFLU_1651 (ihfB)
   03400 DNA repair and recombination proteins [BR:pfs03400]
    PFLU_1651 (ihfB)
DNA replication proteins [BR:pfs03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PFLU_1651 (ihfB)
Chromosome and associated proteins [BR:pfs03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    PFLU_1651 (ihfB)
DNA repair and recombination proteins [BR:pfs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      PFLU_1651 (ihfB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: CAI2795935
UniProt: A0AA35MYR9
Position
1:1813438..1813734
AA seq 98 aa
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGV
NT seq 297 nt   +upstreamnt  +downstreamnt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctctcatccaag
gatgttgagctggctatcaagaccatgctcgagcaaatgtcccagtgcctggcgacgggt
gatcggattgagatacgtgggtttggcagcttctcgctgcactatcgcgcgccgagggtg
gggcgaaatcctaagactgggcagtcggtgagtctggatgggaagtttgtgcctcatttc
aagccggggaaggaattgcgggatcgggtgaatgaggatgaggaagagggcgtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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