KEGG   Pseudomonas fluorescens SBW25: PFLU_2968
Entry
PFLU_2968         CDS       T00899                                 
Name
(GenBank) Topoisom_I domain-containing protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pfs  Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:pfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfs03032]
    PFLU_2968
   03400 DNA repair and recombination proteins [BR:pfs03400]
    PFLU_2968
Enzymes [BR:pfs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PFLU_2968
DNA replication proteins [BR:pfs03032]
 Prokaryotic type
  DNA Topoisomerases
   PFLU_2968
DNA repair and recombination proteins [BR:pfs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PFLU_2968
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact Poty_coat
Other DBs
NCBI-ProteinID: CAI2797192
UniProt: C3KB58
Position
1:complement(3240345..3241382)
AA seq 345 aa
MSDSALPRDLHYVDDTQPGIRRKTVRGKFQYFDPKGVRITDADEIKRLNALAVPPAYTDV
WICADPRGHLQATGRDARGRKQYRYHARWREVRDSDKYARLQEFGNALPTLRKQLEAKIA
EPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIQFQFRGK
SGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEDGERHTVSSQDVNEYLHSLTGADFT
AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIHPAVL
EHFSLGELSKLPKPRLRKGLKAEEVALAMFLEQLAADLPKKAKAG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtccgactctgcgctgccccgcgacctgcattacgttgacgacacccagcctggcatc
cgtcgcaagacggtgcgcggcaagttccagtatttcgaccccaagggcgtacgcatcacc
gacgccgatgagatcaagcgcctcaacgccctggcggtcccaccggcctacaccgatgtg
tggatctgcgccgacccgcgcggccacctgcaagccaccggccgcgatgcacgtgggcgt
aagcagtaccgctatcacgcgcgttggcgtgaagtgcgcgacagcgacaagtacgctcgg
ctgcaggaattcggcaacgccctgccgacattacgcaaacaattggaagcgaaaatcgcc
gagcccggtttcactcgcgaaaaagtcttggccaccgtggtgatgctgttggacgctacg
ctgatccgcgtcggcaatacccaatatgcgcgggacaacaaatcctacgggctgaccacc
ctgcgcacccgccacgtggatgtgaaaggcagcgagatccagttccagtttcgcggcaag
agtggcgtggagcatcagatcagcgtcaaggatcggcgcctggccacggtggtcaagcgc
tgcctggaattgccggggcagaacctgttccagtacctggacgaagacggcgagcggcac
actgtcagctcccaggacgtgaatgaatacctgcacagcctcaccggtgcggacttcacc
gccaaggactaccgcacctgggccggcacggccatggcgctagcggtgttgcgggaattg
gagtggcagcctgagtccgatgccaagcgacacgtcgtggcgatggtcaaggacgtcgcc
aagcagttgggcaacaccccggcggtgtgccgcaagtgctacatccaccccgccgtactg
gagcatttcagcctgggcgaactctccaagctgcctaagccgcgactgcgcaaagggctc
aaggccgaagaggtcgccttggcgatgttccttgaacaactggcggcggacttgccgaaa
aaagccaaggcgggttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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