KEGG   Pseudomonas fluorescens SBW25: PFLU_3988
Entry
PFLU_3988         CDS       T00899                                 
Name
(GenBank) Putative amidase
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
pfs  Pseudomonas fluorescens SBW25
Pathway
pfs00970  Aminoacyl-tRNA biosynthesis
pfs01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pfs00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PFLU_3988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:pfs03029]
    PFLU_3988
Enzymes [BR:pfs01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     PFLU_3988
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     PFLU_3988
Mitochondrial biogenesis [BR:pfs03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    PFLU_3988
SSDB
Motif
Pfam: Amidase VMAP-M8
Other DBs
NCBI-ProteinID: CAI2798183
UniProt: C3JYY3
Position
1:4403938..4405344
AA seq 468 aa
MSEIGQLTAVQLLQHFRNKTLSPVDVTEDALLRIERYNPVVNAYCHVDPEGALKAARASE
QRWLNGQPCGALDGVPASIKDLTLTVGMPTRKGSHTTSAEGPWDIDAPFTAFMRKAGAVL
LGKTTTPEFGWKGVTDNPLYGITRNPWDTCTTAGGSSGGAGAAAALNLGVLHQGSDAGGS
IRIPCAFTGTFGIKPTFGYVPQWPASAMTLLSHLGPMTRTVEDSVLMLQTIAQPDTRDGL
IGAPRTTPWLSGAADLKGLRVAYSPNFGYVDVDPQVAKVVAQAVRGLEQLGAHVEQIDPG
FSDPLEVFSTLWAAGAARLTGPMSEAQKQLLDPGLLRIAQRGERLSLNDFNSALEARAAL
VARMAAFHEHYDVLVSPMMPITAFEAGHDVPPGSGLQEWTQWTPFTYPFNLTQQPAASVP
CGLAANGLPVGLHVVGARFADEQVLRVCQVYAKAFPTEHLQAPITRTR
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgagcgagatcgggcaactgacggcagtgcaactgctgcagcattttcgcaacaagacc
ttgtcgccggtggacgtcaccgaagacgccttgctgcgtatcgaacgctataacccggtg
gtgaacgcctactgccacgtggacccggaaggcgcgctgaaggccgcgcgcgcctcggag
caacgctggctcaacggccaaccctgcggcgcgctggacggtgtgccggcgtcgatcaaa
gacctgacgctgaccgtcggcatgcccacccgcaagggctcgcacaccacatcggccgag
ggcccatgggacatcgacgcgcccttcaccgcctttatgcgcaaggccggcgcggtgctg
ctgggcaagaccaccacaccggaattcggctggaaaggcgttaccgacaacccgctgtac
ggcatcacccgcaacccctgggacacatgcaccacggcgggcggatcctccggcggcgca
ggggcagcggccgccttgaacctcggcgtgttgcaccagggcagcgatgcgggcggttcg
atccggattccctgtgcgtttaccggcaccttcgggatcaagccgaccttcggttatgtg
ccgcaatggccggccagcgccatgaccctcctctcgcacctggggccgatgacccgcacg
gtggaagacagcgtgttgatgctgcaaaccatcgcccagccggacacgcgggatggcttg
atcggtgcgccacggaccacaccgtggttgtcgggcgcagcggatttgaaagggttgcgc
gtggcctacagtcccaacttcggttacgtggatgtcgacccgcaggtggccaaggtggtc
gcccaagcggttcgaggcctggagcagctgggcgcgcatgtcgagcaaatcgacccgggc
ttcagcgaccccctggaggtgttcagcaccttatgggcagccggcgcggcccgcctgacc
gggcccatgagcgaagcgcaaaaacaactgctggaccctggcctgctgcgcatcgcccaa
cgcggcgagcggctgagcctgaatgacttcaactcagccctcgaagcccgcgccgcactg
gtggcacgcatggccgcgttccatgagcactacgatgtactggtgtcaccgatgatgccg
atcaccgcgttcgaggccgggcatgacgtgccaccgggttccggcttgcaggaatggaca
cagtggacgccgttcacctaccccttcaacctgacccaacagcccgcggcatcggtgccg
tgtggattggcggcgaatggcttgccggtgggcctgcatgtagtgggcgcgcgatttgcc
gatgaacaggtgctgagggtgtgccaggtgtatgcaaaagcgttccccaccgagcacttg
caagccccaatcaccagaacacggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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