KEGG   Pseudomonas fluorescens SBW25: PFLU_5793
Entry
PFLU_5793         CDS       T00899                                 

Gene name
mutM
Definition
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pfs  Pseudomonas fluorescens SBW25
Pathway
pfs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PFLU_5793 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfs03400]
    PFLU_5793 (mutM)
Enzymes [BR:pfs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PFLU_5793 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PFLU_5793 (mutM)
DNA repair and recombination proteins [BR:pfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PFLU_5793 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DZR
Other DBs
NCBI-ProteinID: CAY53194
UniProt: C3K3N6
Position
complement(6342684..6343496)
AA seq 270 aa
MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGLPAAKHEHVDIELESGMALRYTDPRRFGAMLWSQD
PHNHELLLRLGPEPLTELFDGDRLFQLSRGKSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRRAAGGISRGRYLKLAIEIKRVLAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEACKVCGTELRNVVLGQRASVFCPRCQR
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcccgagttaccagaagtcgaaaccacccggcgcgggattgccccgcacttggaaggc
cagcgggtcagccgcgtggtggtgcgtgagcggcgcttgcgttggccgatcccggaagac
ctcgatgtgcgcctgtccggccagcgcatcgtgttggtggagcggcgcgccaagtacctg
ctaatcaatgccgaagtgggcaccttgatcagccacttgggcatgtcgggcaacctgcgc
ctggtggaggtcggcctgccggcggccaagcatgaacatgtggatatcgaactggaatcg
ggcatggccctgcgctacaccgacccgcgtcgctttggcgcgatgctctggagccaggac
ccgcacaatcacgaactgctgcttcgcctggggccggagccgctgaccgagctgtttgac
ggtgatcgtttgttccagctgtcgcgtggcaagtcgatggcggtgaagccgttcatcatg
gacaacgcggtggtggtgggcgtgggtaatatctatgcgactgaagcgctgttcgcggcg
gggattgacccacgtcgggccgcaggcggtatttcacgtgggcgctatttgaagctggcg
atcgagatcaagcgtgtgctggcggctgccatcgaacgcggtggcaccacgttgcgagac
tttatcggcggcgacgggcaaccggggtatttccagcaggaactgttcgtctacggccgg
ggaggggaggcgtgcaaggtctgcgggaccgagttgcgcaacgtggtgctggggcagcgg
gcgagtgtgttttgccctaggtgccagcgctga

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