KEGG   Pseudomonas fluorescens SBW25: PFLU_6075
Entry
PFLU_6075         CDS       T00899                                 
Symbol
uvrD
Name
(GenBank) DNA helicase (EC
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pfs  Pseudomonas fluorescens SBW25
Pathway
pfs03420  Nucleotide excision repair
pfs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFLU_6075 (uvrD)
   03430 Mismatch repair
    PFLU_6075 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfs03400]
    PFLU_6075 (uvrD)
Enzymes [BR:pfs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PFLU_6075 (uvrD)
DNA repair and recombination proteins [BR:pfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PFLU_6075 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     PFLU_6075 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 AAA_22 DUF1175
Other DBs
NCBI-ProteinID: CAI2800200
UniProt: C3K4G1
Position
1:6651526..6653709
AA seq 727 aa
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgcgcgatgatctctctcttttgctgaactccctcaacgatgcccaacgccaggccgta
gccgcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtaggcaccttccacggcctggcgcaccgcctgttg
cgggcgcactggcaggaagcgggcctgagccagaccttccagattctcgacagcgatgac
cagcaacgcttggtcaagcgggtgatccgcgaactggggctcgacgaacagcgctggccg
gcgcgccaggcccaatggtttatcaacggccagaaagacgaaggcctgcgcccgcagcac
atccaggccagcggcgatttgttcctggccaccatgcgcagcatttatgaagcctacgag
gccgcgtgcgtacgcgccggggtgatcgacttctccgagctgctgctgcgcgccctcgac
ctgtggcgcgacaacccgggtttgctggcccattaccagaaacgcttccgccacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaaa
ggtggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttcccggacgccgtcaccatccgc
ctggagcagaactaccgctccaccgccggtatcctcaaggcggccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggtggcgaaggcgaagccatc
aacttgtacgccgcgttcaacgagcacgatgaagcgcgctacgtagtggaaaccatcgaa
agtgcactgaaaaccggcctggcgcgcagcgatatcgccattttgtatcgctccaacgcc
caatcgcgggtcttggaagaagccttgctgcgcgaacgcatcccgtaccgcatctacggt
ggccagcgcttcttcgagcgtgccgagatcaagaacgccatggcctacctgcgcttgctg
gaaggccgcggcaacgatgcggcgctggagcgggtgatcaacatcccggcccgtggcatt
ggcgaaaagactgtcgaagccattcgcgaccacgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctgatcgccaataaaggcctgaccggccgcgccgccggggcgctg
ggtgtgtttgtcgaactgatcgagaacctcgccgccaagtgcgcggaaatgcctctgcac
ttgatgacccagaccgtgatcgagcagtccgggctgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcccgtgcg
ttcgaaaacaccgaggaagacgaagagctgacaccgctcgccgctttcctcggccatgcg
tcgctggaagccggcgatacccaggccgatgagcatgaagacagcatccagttgatgacc
ttgcacagcgccaagggcctggagttcccgtacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagccgggccgtcttgaggaggagcgccgcctg
gcctacgtgggcatcacccgcgcgatgcagaacctggtgatgacctacgccgagacccga
cgcctgtacggcagcgagacctacaacaaggtgtcgcgtttcgtacgtgaagtgccgaag
gggctgatccaggaagtgcgcttgtccaacagcgtcagccgcccgttcggcggaggtcag
cagcagaactccagcagtatgttcgccggttccgagattccggaaacccagttcagcctt
ggccagcaggtcaggcattcggtgttcggcgaaggcgtgatcctcaacttcgaaggcgcc
ggtgcccaggcgcgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgatgggt
tacgcgaagctcgaagccatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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