KEGG   Pyrococcus furiosus DSM 3638: PF1562
Entry
PF1562            CDS       T00075                                 
Name
(GenBank) DNA-directed RNA polymerase subunit a
  KO
K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Organism
pfu  Pyrococcus furiosus DSM 3638
Pathway
pfu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PF1562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfu03021]
    PF1562
Enzymes [BR:pfu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PF1562
Transcription machinery [BR:pfu03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     PF1562
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 Bac_DNA_binding A_deaminase
Other DBs
NCBI-ProteinID: AAL81686
UniProt: Q8U0M5
Structure
Position
complement(1455699..1456892)
AA seq 397 aa
MVSLSTIKSLIEKKGANLPENVKSELYEKLKKYNEKYKLTKAEIEAIIDDVVKEYERALV
EPGEPVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPMMTV
YLDEEHRYDRAKAEEVARRIEGTTLENLARSTTLDLINFEFIVEIDPERLERSGLTMEKV
VKKLESSFKSAEFEVDGYTLIVRPKKADKISDLRRFAEKIKKHRLKGLSGVGKTIVRKEG
DEYVIYTEGSNFKQVLKVPGVDPTRTRTNNIHEIAEVLGIEAARNAIIDEIVSTMQEQGL
EVDIRHIMLVADMMTLDGIVRPIGRHGVVGEKSSVLARAAFEITVQHLFEAAEKGEVDNL
NGVIENVLIGQPVPVGTGMVKLTMKLPLRPQKEKEEV
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggtctctctttctactattaaatctttaattgaaaagaagggagcaaatcttcctgaa
aatgtgaaatctgaactttatgagaagcttaagaagtataacgagaagtacaaattaacg
aaggctgaaattgaggcaatcattgatgatgttgtaaaagaatatgaaagggcattagtt
gaacctggggagccagttggtactgttgctgcccagtctattggagaaccttcaacccag
atgactctcaacactttccactatgcaggtgttgctgaaattaacgttactttaggtttg
ccaagaattatagaaatcgtggatgctaggaaaaatccatcaacccccatgatgactgta
tacttagatgaggaacacagatatgacagggcaaaggccgaggaagtggctagaagaatt
gaaggaacaactttagaaaatcttgccagatcaacaactttggacttaataaactttgaa
tttatagttgaaattgatcctgagaggctcgagagaagtggacttactatggaaaaagta
gtcaaaaagctagaaagttcattcaagagcgctgagtttgaggttgatgggtatacccta
attgtaaggccaaagaaggcagataagatttctgacctcagaagatttgccgaaaagatt
aaaaagcaccgtcttaagggtctctcgggcgtcggtaaaacaatagtgaggaaagaggga
gacgagtacgtaatatacactgaaggctccaactttaagcaagtcttaaaagtcccgggt
gtagatccgacaagaactaggacaaataacatacacgaaattgcagaggtgcttggaata
gaggccgcaagaaatgcaataattgatgaaatagtgagtacaatgcaggaacaaggtcta
gaagtagatataaggcacatcatgctcgttgcagacatgatgactttagatgggatagtg
aggccaattggtagacatggagttgttggagagaagagtagtgtacttgcaagagctgcc
ttcgagattactgtccagcacttatttgaggctgctgaaaaaggtgaagttgacaactta
aacggtgtaattgaaaacgtcttaatcgggcagcccgttccagtgggaacgggcatggtt
aagttaactatgaaactaccactaagaccacagaaagaaaaggaggaggtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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