KEGG   Pseudomonas simiae PCL1751: PF1751_v1c43070
Entry
PF1751_v1c43070   CDS       T03766                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pfw  Pseudomonas simiae PCL1751
Brite
KEGG Orthology (KO) [BR:pfw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfw03021]
    PF1751_v1c43070
Transcription machinery [BR:pfw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PF1751_v1c43070
SSDB
Motif
Pfam: DUF6596 Sigma70_r2 Sigma70_r4_2 TPR_2 TPR_12 TPR_1 TPR_8 Sigma70_r4 TPR_11 TPR_21 TPR_7 TPR_16 TPR_10 TPR_14 TPR_4
Other DBs
NCBI-ProteinID: AJP54002
Position
complement(4786674..4787897)
AA seq 407 aa
MTLSVEAVYRSESRRVLATLIRLLGDFNLAEEALHEAFFVAVQRWPLDGVPDNPRAWLVS
TGRFKAIDRLRREARFTPLLQEQADALEAADWSDQDVEDDRLRLIFTCCHPALAADAQAA
LTLREICDLTTEEIARAFLATPATIAQRIVRAKGKIREAKIPYQVPSLDELPERLDSVLR
VIYLVFNEGYSAFMGADLTREALTREAIRLGRLLLELLPEPEVMGLLALMLLHESRRPAR
TSANGELVLLDEQDRSLWDAALIAEGCTLVEQALGTRRFGPYGLQAAIAAVHAEASRADE
TDWPQIVGLYDVLLRAAPSPVIELNRAVALAMRDGPLAGLQQVEGILARGELLDYHWVHS
ARGEFCRQLGRVKEARAAYEKALSLTQQAPEKRFLEQRLAELQSPLR
NT seq 1224 nt   +upstreamnt  +downstreamnt
ttgaccctgtcggtcgaggccgtttaccgcagcgaatcacgccgggtgctcgcgacgctg
attcgcttgctgggtgacttcaacctggccgaggaagccctgcacgaagcgtttttcgtg
gcggtgcagcgctggccgctggacggtgtgccggacaatccacgggcttggctggtgtcg
actggtcgcttcaaggccatcgaccggctgcgccgcgaggcgcgtttcactccgttgctg
caggaacaggccgatgcgctggaagcggctgactggagtgaccaagacgtggaagacgac
cgcctgcggttgatcttcacctgctgccacccggcgttggcggcggatgcccaggccgcg
ctgaccttacgtgagatctgtgacctcaccaccgaagaaatcgcccgcgctttcctggcc
acacccgccaccatcgcccagcgcatcgtgcgggccaagggcaagatccgcgaggccaag
atcccttaccaagtgccatccctggacgaattgcccgagcggctggacagtgtattgcgg
gtgatttacctggtgttcaacgaggggtattcggcgttcatgggcgctgacctgacccgt
gaagcgttgacgcgcgaagccattcgtctggggcgtttgttgctggaattgctgcccgag
cccgaagtcatggggctgctcgcactgatgctgttgcatgagtcccgacgcccggcgcgc
acctcggccaacggggagttggtgctgctggatgaacaggaccgctcgctgtgggatgcg
gccctgattgccgaaggttgcacgttggtagagcaggcgctgggcactcggcgctttggc
ccgtatggcctgcaagcggccatcgcggcagtgcatgccgaagcgtcgcgtgcagatgag
acggactggccgcagatcgtcgggctctacgatgtattgctcagggcggcgccatcaccg
gtgatcgaattgaaccgcgccgtggcgctggctatgcgggatgggccgttggcagggttg
cagcaagtggaggggattctggcgcgcggtgagttgctggattaccactgggtgcattcg
gcgcggggggagttttgtcggcaattggggcgagttaaagaggcgcgcgcagcttacgaa
aaagccctgtcactgacccagcaagccccggagaaacgcttcctcgaacaacgcctggcc
gagctgcaatcgcccctccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (21)   

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