KEGG   Pseudomonas lurida: A7318_18805
Entry
A7318_18805       CDS       T04730                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pfx  Pseudomonas lurida
Pathway
pfx02020  Two-component system
pfx02025  Biofilm formation - Pseudomonas aeruginosa
pfx02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pfx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A7318_18805
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    A7318_18805
  09142 Cell motility
   02040 Flagellar assembly
    A7318_18805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfx03021]
    A7318_18805
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pfx02035]
    A7318_18805
Transcription machinery [BR:pfx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A7318_18805
Bacterial motility proteins [BR:pfx02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    A7318_18805
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_30 UPF0122 Glyco_tranf_2_4 MarR_2 GerE Rv2175c_wHTH Phage_terminase
Other DBs
NCBI-ProteinID: AOE80549
UniProt: A0A5E6Q8G9
Position
complement(4174922..4175662)
AA seq 246 aa
MTASGYNLYKKSARDSQGELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHMEPSRDLEDE
RFQGALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq 741 nt   +upstreamnt  +downstreamnt
atgacagccagcggctacaacctttacaagaaatcggcacgtgacagccagggtgaattg
atcgagcgctatgcgcccctggtcaagcgcatcgcctatcacttgctggcacgcctgccc
gccagcgtccaggtcgaagacctgatccaggcgggcatgatcggcctgctcgaagtgtcg
accaaatacgacgcgagcaagggcgcgagtttcgaaacgtatgcgggtatccgtatccgt
ggcgcgatgctcgatgaagtgcgtaaaggtgactgggcgccgcgttcggtacatcgcaat
acacgcatggtcagtgacgcaattcgcgcaattgaagcaaaaaccggtcgcgacgctaaa
gatcacgaagttgcggccgaactccaattgagtctcgacgattactacgggattttgaac
gataccttgggcagccgcctgttcagtttcgacgacctcttgcaggacggcgagcacgaa
gggctgcacgaggacggcgcgagtgctcatatggagccatcgcgtgacctggaagatgag
cgtttccagggggcgttggcggatgcgattgccaatttgccggagcgtgagcgactggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggcgtc
agcgagtcgcgggtcagccagttgcacagccagtgcgcagcccgcttgcgggggcgtttg
ggagagtggcgagcgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system