KEGG   Pestalotiopsis fici: PFICI_05701
Entry
PFICI_05701       CDS       T04924                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03020  RNA polymerase
pfy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFICI_05701
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFICI_05701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfy03021]
    PFICI_05701
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_05701
Transcription machinery [BR:pfy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PFICI_05701
  RNA polymerase III system
   RNA polymerase III
     PFICI_05701
  RNA polymerase I system
   RNA polymerase I
     PFICI_05701
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFICI_05701
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 19270714
NCBI-ProteinID: XP_007832473
UniProt: W3XCP0
Position
Unknown
AA seq 148 aa
MSSGDAQLFEETFVVTNYDQAKYDRVARITATSNDNATQMTLDINIELFPCRVGDPLSVV
LATTLSLDGKAGEEERGWRDVKAGTETASLADNYDYVCHGKIYKFEDGADGQSIKAYISF
GGLLMMLEGPSKKLLPLRVDNTYLLVKK
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtcgtccggcgacgcacagctctttgaggaaacctttgtggtgacaaactacgatcag
gcaaagtacgaccgcgtggcgcgcatcacggccacatccaacgacaatgccacgcaaatg
accctggacatcaacattgagctctttccctgccgcgtgggcgacccgctgagcgtcgtg
ctcgccaccaccctgagcctcgacggcaaggctggcgaggaggagcgcggctggcgggac
gtcaaggccggtaccgagacggccagcctggcggacaactacgactacgtgtgccacggc
aagatttacaagtttgaggatggtgctgatggtcagagcatcaaggcatacatttcattt
ggcggtctgctcatgatgcttgagggaccttccaagaagcttctccctctgcgagtcgac
aacacctatctgctggtcaagaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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