KEGG   Pestalotiopsis fici: PFICI_06697
Entry
PFICI_06697       CDS       T04924                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFICI_06697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfy03021]
    PFICI_06697
Enzymes [BR:pfy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PFICI_06697
Transcription machinery [BR:pfy03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     PFICI_06697
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 LYRM2-like
Other DBs
NCBI-GeneID: 19271710
NCBI-ProteinID: XP_007833469
UniProt: W3X6M5
Position
Unknown
AA seq 1488 aa
MATTTETALKGTSAVAPVKHQVVDKVPKRFRQIKFGIQSNQDIVNQAVVEVADRTMYDLD
RGREPIKHGPLDKRLGISSKQATCQTCDLRLTDCPGHFGHIRLPLPVFHIGYLRFTMKIL
QEICKDCSRVLLTEPERRSFLKMLRKAPDNMNRQAILKKINETCRKTKSCPYCTATNGQI
RKAGPLKLVHDKFVAFNKSTSQKKQPPQSKIDFDNSFNEAKKHNNDLEKHVRKAMEDLNP
LRVLNLFKQISSTDCELLGLDPTEGRPEMFLWQFVPAPPVCIRPSVAQEGASNEDDLTTT
LSQVVFICSLIRGALQKGASLQTIMEQWDYLQLHIAVYVNSDVPGLTNTGIVKSMRGFCQ
RLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLGIDQVAVPILVAMNLTYPERVHRENIEK
LRKCVLNGPSVYPGAQGIIKQDGDQTYKQTLKFGDRTRVAKELRFGDVVERHLEDNDIVL
FNRQPSLHKLSIMSHLAKIRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARAEAIN
LMGVKNNLATPKNGEPVIAATQDFVTAAYLLSGKDVFYDRKTFTYICQHMMDGKTHLDLP
PPAILKPQRLWTGKQVFSILMRPNKQCNVKINLDAKCREYVPPNKGSSDPRERSRAPDMC
PSDGWLVVRNSEVMCGRMDKSTVGAGKKDSIFYVIMRDFGPDEAVIAMNRLAKLCARALT
NQGFSIGIGDVFPTASLTAEKQELVKNAVKKTDQLIASYNDKTLQKAAGCSMEETLENSI
SGTLSQVRSAAGAYCIATLSTKNAPWIMATSGSKGSNINVAQMIALVGQQIIGGSRVADG
FQDRTLPHFHKLARQPAAKGFVANSFYTGLVPTEFLMHAMSGREGLVDTAVKTAETGYMS
RRLMKSLEDLSTQYDDTVRTSGGNVVQFQFGADKLDPVDMEGSAVPVHFDRTWSHAENLT
WNNKERALLPFEIREICDSMIDKERARYQRRGLLHGEPLHYEDETDYGIDEHESSRHFLR
TIEGYVNDLAKKLARVREEFGLDGYLEKPTLSAATIDKNEKGDPARTHTERVAKVSQRTL
VHFITLCLEKFKKAHVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVPRIK
EIINASKTISTPVITCPLENNRQIEAARVVRGRVEKTFIEDILRHIEDEWEANKAYITLA
IDMEALEAMNLGIGLHDVKSAIAKAKKLKILEGDMSVYPIDGTIEIAVTLPDESKSRSVR
TKTETPADLLTRVSHLKRALPAVPVSGYPEAARAIIQTAEGKADKPGEAPPYVHTVLVEG
YGLRQCMNTEGVIGTKVISNNVMEANQVLGIEAARTTIAKEIDAVMGEMDIDPRHMELLA
DVMTYKGEVLGITRFGLSKMRDSVLQLASFEKTPDHLFEAAAGMKGDKIEGVSEKIIMGQ
TMTVGTGAFQVVRKLGLSDQHLQKLPTAFEDAWAADTKERKKLKSRKA
NT seq 4467 nt   +upstreamnt  +downstreamnt
atggcgacaactaccgaaactgccctcaagggcaccagtgccgtcgcgcctgtgaaacat
caggttgtcgataaggtaccgaagcgattcagacagatcaagttcggcatccagtcaaac
caagacattgttaatcaagcggtagtcgaggtcgccgatagaaccatgtacgacctcgac
cgcggaagagagcccattaagcatggacctctcgacaaacgtctcggtatctcgagcaag
caggctacatgtcaaacctgcgacctgcgactgacagactgtcctggccattttggtcac
attcgcctaccgcttcctgtctttcatatcggctacctgcgtttcactatgaagattcta
caagaaatatgcaaggactgctcacgagtccttctcaccgaacctgaacgtcgcagcttc
ctcaagatgctgcgcaaagctcccgacaacatgaatcgtcaggccatcctcaaaaagatc
aacgaaacatgcagaaagacaaagagttgcccctactgcaccgcaacaaatggccaaatt
cgaaaggccggccctttgaagctggtccacgacaagttcgttgcttttaacaagtccacg
tcgcaaaagaagcagccgcctcagtccaagattgattttgacaactccttcaacgaagcc
aagaagcacaacaacgatttggaaaaacacgttcgcaaggctatggaggatttgaacccc
ctcagagttctgaatctgttcaagcagatcagctccacagactgcgagttgcttggcctg
gatcctaccgagggacgccctgaaatgttcttgtggcaatttgtccctgctcctccagtc
tgcattcgaccatccgtcgcacaagagggagcaagcaacgaagatgatctcactactacg
ctaagtcaagtcgtcttcatttgcagtctcatcagaggagcattgcagaagggcgcaagt
cttcagactatcatggagcagtgggattacctccaattgcatatcgctgtttacgtaaac
agtgacgttcctggcctcacaaatactggaattgtgaagagcatgagaggcttctgccaa
cgtttgaagggtaaacagggtcgcttccgtggtaacctttctggtaaacgtgtcgacttt
tcaggacgaactgtcatttctccagatcccaatcttggcatcgatcaagtcgcagtgcct
attttggtagccatgaatttgacatatcccgagcgcgtccatagggagaatattgagaag
ctgcggaagtgcgttctgaacgggcccagtgtctatcctggagcacagggaatcatcaaa
caggacggcgaccaaacatacaaacagacgctcaagttcggtgacagaaccagggtagct
aaggaactacgcttcggtgatgttgttgagagacatctcgaggataacgacattgttctg
ttcaaccgtcagccatctctccacaagctcagtatcatgagtcatttggccaaaatcaga
ccttggagaacattccgtctcaacgagtgtgtgtgcaacccttacaacgccgatttcgat
ggtgatgagatgaaccttcacgtcccacaaacagaagaggcacgtgcggaagcaatcaac
ctcatgggagtcaagaacaacttggctacacccaagaacggtgaacctgtcattgctgca
acacaggatttcgtcactgcagcctaccttctcagtggcaaagatgtcttttacgaccgc
aagacctttacctacatttgccagcatatgatggacggcaagacccaccttgacctgcca
cctcctgctatcctcaagcctcaacgcttgtggacgggaaagcaagtcttcagtatcctc
atgaggccgaacaagcagtgcaacgtcaagatcaacctggacgccaaatgtagagaatat
gtgcctccgaacaagggctcaagtgaccccagagaacgatcaagggctcctgacatgtgt
ccaagtgacggctggctcgttgtacgcaactctgaagtcatgtgcggcagaatggacaag
tcgactgtcggagctggcaaaaaggactcaatcttctatgtcatcatgagagatttcggt
ccagacgaggccgtcatcgccatgaatcgtctcgctaagctttgtgctcgagctttaaca
aaccagggattctcaatcggtattggtgatgtctttcccacagcatctctcactgcggag
aagcaggagctggttaagaacgcggtcaagaagacagatcagctcattgcctcctacaac
gacaagacactacagaaagcagcaggttgttccatggaagaaacgttggagaactccatt
tccggtacactcagtcaagttcgttcggctgctggtgcatactgtatcgcaactctgagt
accaagaatgctccatggatcatggctacatcaggttcgaagggttcgaatatcaacgtc
gctcagatgattgcccttgtcggacaacagatcataggaggatcacgtgtcgccgatggc
tttcaagatcgcacactaccacactttcacaaattggcacgtcaaccagcagccaaaggt
ttcgtggcaaacagtttctacacaggtctcgtgccaactgaattcttgatgcacgccatg
tccggacgtgagggtctggtcgataccgctgtcaagactgcagagaccggttacatgtcc
cgacgtctcatgaaatctttggaggatctttccacgcaatacgatgacacggttcgaaca
tctggcggcaatgtggtgcagttccaattcggagctgacaagctcgaccccgtagatatg
gagggttcggccgtgccggtgcactttgatcgtacttggtcccacgccgaaaacctgaca
tggaataacaaggaacgcgcactcttaccatttgagattcgtgaaatttgcgactccatg
atcgacaaggaacgagctcgataccagcgacgaggcttattacatggcgagccactccac
tacgaagatgagaccgattacggaattgatgagcacgagagtagccggcatttcctcaga
actattgaaggatacgtgaacgacctggcaaagaagttggcacgagttcgcgaggagttt
ggcctggatggatatctcgaaaagccaactttgagtgctgccactatagacaagaacgaa
aaaggagacccggcaagaacccataccgagagggttgccaaggtgtcccagcgaacgctt
gttcacttcatcactctgtgcttggagaagttcaagaaggcgcatgtagaacctggccac
gccgtcggagctgtcggagcacagtcgattggtgagcctggtactcagatgaccctgaag
actttccatttcgctggtgttgctggcatgagtattacacagggtgtgccccgtatcaag
gaaatcatcaacgcatcgaagacaatcagtactccagttatcacttgccctcttgagaac
aacaggcagatcgaagctgcccgtgtagtcagaggccgtgttgagaagaccttcattgag
gacattctcagacacatcgaagacgaatgggaagcaaacaaagcgtacatcacactggcc
attgacatggaggcactagaagcaatgaatttgggcattggtcttcatgatgtgaagagc
gcaattgccaaagccaagaagctcaagatcttggagggagatatgtcagtctacccaatc
gacggtaccattgagattgcagtcaccctgcccgacgaaagtaagagccggagcgtccga
accaagaccgagacaccggcagacttgctcactcgagtgagtcacctcaagcgtgccctg
ccggcggttccagtttctggttatccggaagccgctcgtgccattatccagactgccgaa
ggaaaagccgacaagcctggcgaagctcctccttacgtccacacagttctggtggaaggg
tatggccttcgacagtgcatgaacactgaaggtgtcattggtaccaaggtcatctcgaac
aacgtcatggaggccaaccaagtactcggtatcgaagcagcgcgaacaaccattgcaaag
gaaattgacgccgtcatgggagaaatggacatcgatccgcgacatatggagttgttggca
gatgtcatgacctacaagggcgaggtgttgggtatcacgagattcggtctctccaagatg
cgtgactcggtccttcagcttgcttcctttgagaagacgcccgaccacttgtttgaagct
gcagccggcatgaagggagacaagattgagggtgtttcggaaaagatcatcatgggacaa
accatgacagtaggcactggtgcattccaggttgtcagaaagctgggtctcagtgaccaa
catcttcaaaagctaccgacagcctttgaagacgcatgggctgctgataccaaagagaga
aagaagctcaaatccaggaaggcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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