KEGG   Pestalotiopsis fici: PFICI_12352
Entry
PFICI_12352       CDS       T04924                                 
Name
(RefSeq) Flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03030  DNA replication
pfy03410  Base excision repair
pfy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFICI_12352
   03410 Base excision repair
    PFICI_12352
   03450 Non-homologous end-joining
    PFICI_12352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfy03032]
    PFICI_12352
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_12352
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfy04147]
    PFICI_12352
DNA replication proteins [BR:pfy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PFICI_12352
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PFICI_12352
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PFICI_12352
Exosome [BR:pfy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PFICI_12352
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 19277365
NCBI-ProteinID: XP_007839124
UniProt: W3WNH4
Position
Unknown
AA seq 392 aa
MGIKNLFSIIKDEAPDAVKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQMLTNEEGQT
TSHLMGMFYRTLRMVDNGIKPLYVFDGKPPKLKSGELAKRFQRKAEAHEGLEEAKETGTA
EDVEKFSRRTVRVTREHNEECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYGTASEDM
DTLCFESPILLRHMTYSEQRKEPIQEIHLNKVLEGLMMDRKQFVDLCILLGCDYLDPIPK
IGPSTALKLIREHGSLEKVVEWIESSGKYTIPEDWPYADARDLFFNPDVRKAEDPECDFK
WEKPDIDGLVNFLVTEKGFSEDRVRSGGARLEKNSKSSQQARLEGFFKVIPKTEEQKQAH
KRKVEEQNDARKKKLKEDKKEKAKQKAKPRGA
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgggtatcaagaacctcttctccatcattaaggatgaagctccagatgctgtcaaggag
ggtgagatcaagaaccagttcggtcgcaaggttgctattgacgcctccatgagcatttac
agtttcctcattgcagtccgatccgacggccaaatgctcacaaacgaggagggccaaacc
acttcacatctcatgggcatgttctaccgcacacttcggatggtcgacaatggaatcaag
cccttgtacgttttcgacggcaagcctcccaagctcaagtctggtgagctggccaagcga
ttccagcgcaaagccgaggcacacgagggcctagaggaagccaaggagacaggtaccgcc
gaagatgtcgaaaaattctcgagacgaaccgttcgagtcacccgtgagcataacgaggag
tgccagcgactgctcaagctcatgggcattccgtacatcattgcgcccactgaggccgaa
gcccagtgcgccgtcctggcaagagccggcaaggtctatggcactgccagtgaggatatg
gatactctttgtttcgagagtcccatcctgctgcgacacatgacttatagcgaacagcga
aaggagccgattcaggagattcaccttaacaaggtgctcgaaggtctgatgatggatcgc
aagcagtttgtcgatttgtgtatcctgttgggatgcgattacctcgaccctattcccaag
atcggcccctcgaccgctctgaagcttattcgcgaacacggttccctcgagaaggtggtt
gaatggattgagagcagtggaaagtacaccatccccgaggactggccttatgccgatgct
cgagacctcttcttcaacccagacgtccgcaaggccgaagacccagagtgtgatttcaag
tgggaaaagcccgacattgacggtctggtcaacttccttgtcactgaaaagggattctcc
gaagacagagtcagatctggtggcgcaagactggagaagaactcgaagagctctcaacaa
gctcgactagagggcttcttcaaagttattcccaagactgaagagcaaaagcaagcccac
aagcgcaaggtagaggagcaaaatgatgctcgcaagaagaagctcaaggaagataagaag
gaaaaggccaagcaaaaggccaagcctcgtggggcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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