KEGG   Pseudomonas fragi: AV641_04655
Entry
AV641_04655       CDS       T04285                                 
Name
(GenBank) ribosome biogenesis GTPase Der
  KO
K03977  GTPase
Organism
pfz  Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfz03009]
    AV641_04655
Ribosome biogenesis [BR:pfz03009]
 Prokaryotic type
  GTPases
   AV641_04655
SSDB
Motif
Pfam: MMR_HSR1 FeoB_N KH_dom-like GTP_EFTU Dynamin_N AIG1 RsgA_GTPase Roc AAA_22 Ras DUF5906 AAA_24 NOG1 NTPase_1 cobW TniB AAA_18 SRPRB AAA_14 RHD3_GTPase
Other DBs
NCBI-ProteinID: AMB78412
Position
995798..997267
AA seq 489 aa
MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKRSYVVANKV
DNIDPELARAEFAPLGMGHAIPIAGAHGRGITQMLEIALSDFPKDPEEEEEGEAEVVLEG
QEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN
DEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIAINKWDGMTPSEREFVKVELTRRLFFVDFADIHFISALHGTGVGNLYQSV
QNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQVE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEANKNSLTDRQVNKKRRMMSHHKK
AEKKRKDKR
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggttcccgtaatcgccctggtgggccgacctaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgcgacgccatcgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggccaagtggcaagggcgttcctacattctggtcgacaccggcggtatc
tccggtgacgagcacggtatggacgaaaagatggccgagcagtcgctgctggctatcgaa
gaagctgacgtcgttctgttcctggtagatgcaaaagcgggtttcacagccgctgaccag
atgattggcgaacaccttcgcaaacgtaacaagcgctcgtatgttgtcgccaacaaggtc
gacaacatcgatcctgaattggcgcgtgcagaatttgcccccttgggtatgggccatgcg
attccgatcgccggtgcccatggtcgtggtatcacccagatgctggaaattgccctgagc
gacttcccgaaagatccggaagaggaagaagaaggcgaagccgaagtcgttcttgaaggt
caggaagccaagcgcatcccgggcccgagcgaaaaagacgggatcaagatcgccatcatc
ggtcggcctaacgttggtaaatcaacgctggtcaaccgcatgctgggtgaagaccgggtt
atcgtttatgacgagccgggcaccacgcgcgacagtatctacatcccgttcgagcgtaac
gacgagaagtacacgctgatcgacaccgcgggtgtgcgcaagcgcggcaagatccacgaa
gaagtagaaaaattctccgtggtcaaaaccctgcaggccatcaaagacgccaacgtggtg
atctttgtgatggatgcccgcgaaggcgtggtcgaccacgatctcaacctgttgggcttt
gcgctggaggccggtcgggctctggtcatcgcgatcaacaagtgggacggcatgacgccg
agcgagcgcgagttcgtcaaggtcgaattgacccgtcgtctgttctttgtcgacttcgcc
gacatccacttcatctcggcgctgcacggcacgggcgtaggtaacctgtaccagtcggtg
cagaactccttcaagtcagcggttacccgctggccgaccaaccgtctgacccagatcctg
gaagacgcagttggcgagcacgcgccgccgatggtcaacaaccgccggatcaagttgcgc
tatgcccacctgggtggtgccaacccgccgattattgtgatccacggtaaccaggtcgag
aaggttccaaagtcttacgtccgttatctcgaaaacacctaccgtcgtgtcttgaagctg
gtcggtacgccgatccgcatcgagttcaaaggtggcgagaacccgtacgaagccaacaag
aactcgctgaccgaccgtcaggtcaacaagaagcgccgcatgatgtcgcaccacaagaaa
gccgagaagaagcgcaaagacaagcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (26)   

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