KEGG   Pseudomonas fragi: AV641_12245
Entry
AV641_12245       CDS       T04285                                 
Name
(GenBank) amidase
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
pfz  Pseudomonas fragi
Pathway
pfz00970  Aminoacyl-tRNA biosynthesis
pfz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AV641_12245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:pfz03029]
    AV641_12245
Enzymes [BR:pfz01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     AV641_12245
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     AV641_12245
Mitochondrial biogenesis [BR:pfz03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AV641_12245
SSDB
Motif
Pfam: Amidase
Other DBs
NCBI-ProteinID: AMB79788
Position
complement(2726603..2727943)
AA seq 446 aa
MKDIAQLARDLAEGRTTSEALVKQALARIEAHREAGGVAYISVDARSALLAARASDLARS
SGYVPSALAGLPVSIKDLFDVAGQITASGSSLLAEAPAASRDAVVVERLRAAGAIVLGRT
NMSEFAFSGLGLNPHYGTPLTPCAEQRIAGGSSSGAAVSVALEMAVAGLGTDTGGSIRIP
AAFCNLTGFKPSASRVPLTGTFPLAPSLDSIGALTRSVADSILLDRILSGEQLATPMPSL
AGLRLAVTRDFVLDQLDETVAVAFERSLGLLAEAGASIRWFDFPELHQLPRINAAGGLTA
AEAWHGHRQWLEGDDAQQYDARVAQRIRRGAAIGAADYLDTQAERQRLIAIARERLGDAD
AWLMPSVAVVPPKLADLATDESFFAANGLVLRNTSVINFLDGCALSLPCQLAEELPVGLS
IAGLHGQDARVLQVSRAVEALLRGVA
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaaagatattgcacagctcgcccgggacctggctgagggtcgtaccaccagcgaggcg
ctggtcaaacaggcattggcccgcattgaggcacatcgcgaggcaggcggagtggcttat
atcagcgttgatgcccgcagcgccttgctggcggcccgtgccagcgacctggcgcggtct
tcgggctatgtgccgtcggccctggccggcctgccggtttcgatcaaggacctgttcgat
gtggccgggcagatcacggccagcggctccagcctgctggccgaggcaccggcggccagt
cgcgatgcagtggtcgtggagcggttgagagcggcgggggctattgtgctgggtcgaacc
aatatgagtgagtttgcattttccggtctcggactgaatcctcactacggcacaccgctg
accccatgtgcagaacagcgcattgccggtggctccagctccggcgccgcggtcagtgtg
gcgctcgagatggcggtcgcggggctgggcaccgataccggcggctcgatcaggattccg
gcggccttctgcaatcttaccgggttcaaacccagtgccagtcgcgtcccgctaaccggt
accttccccctggcgccgagcctggattccattggcgctctgacccgcagtgtcgccgac
agcatcctgctggaccggattctctcgggggagcaactcgctacccccatgccgtccctg
gccggtctgcgcctggcggtgacccgggatttcgtcctcgatcagctggatgagactgtg
gctgtggctttcgaacgcagtttgggcctgctcgccgaggccggggccagcatccgctgg
tttgattttcccgagctgcaccagttgccccgtatcaacgctgccggcggactgaccgcc
gccgaagcctggcacggccatcgccagtggctggaaggcgacgacgcacagcagtacgac
gcccgtgtcgcccagcgcattcggcgcggtgcggccattggtgcagctgattacctggat
acccaggccgaacgccagcgcttgattgccatcgcccgggagcgtctgggcgatgccgat
gcctggctgatgcccagtgttgccgtggtaccgccgaagctggcagaccttgccacggac
gaaagctttttcgccgccaatggcctggtgctgcgcaataccagtgtgatcaattttctc
gacggttgcgccttgagtttgccctgtcagctggctgaagagttgccggtggggctatca
atcgcgggactgcacgggcaggacgcacgggtgctgcaagtgtcgcgcgcggttgaggct
ctgttgcggggagtcgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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