KEGG   Pseudomonas fragi: AV641_20795
Entry
AV641_20795       CDS       T04285                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pfz  Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfz03019]
    AV641_20795
   03009 Ribosome biogenesis [BR:pfz03009]
    AV641_20795
Messenger RNA biogenesis [BR:pfz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AV641_20795
Ribosome biogenesis [BR:pfz03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AV641_20795
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AMB81337
Position
complement(4624377..4624919)
AA seq 180 aa
MNNAQNLIWIDLEMTGLDPDNDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLARMDEW
NTRTHGGSGLTQRVKDSTTTMAQAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYTHMK
TLESYFHYRNLDVSTLKELVARWAPEVRDSLVKKGTHLALDDIRESIAELQHYRKHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgaacaacgcgcagaacctgatctggatcgacctggaaatgaccggtctggatcctgat
aacgacgtcattattgaaatggccaccattgttaccgacagcaatctcaacaccctggct
gaaggtccggtcatcgcgatccatcacagcgatgcagtgctggcgcgcatggacgaatgg
aacactcgcacccacggtggcagcggcctgacccagcgggtcaaggacagtaccaccacc
atggcccaggccgaagcgcagaccatcgcctttctggaacagtgggtgcctaaaggcaaa
tcaccgatctgtggcaacagcatctgtcaggaccggcgctttttgtacacccatatgaaa
accctcgaaagctacttccactaccgcaatctcgacgtctcgacccttaaagagctggtt
gcccgctgggctccggaagtgcgtgacagcctggtgaaaaaaggcacgcacctggcactg
gacgacattcgcgagtcgattgccgagctgcagcactaccgcaagcacttcatcaagttc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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