KEGG   Phaeobacter inhibens DSM 17395: PGA1_c05870
Entry
PGA1_c05870       CDS       T02192                                 
Symbol
ruvB
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pga  Phaeobacter inhibens DSM 17395
Pathway
pga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PGA1_c05870 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pga03400]
    PGA1_c05870 (ruvB)
Enzymes [BR:pga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PGA1_c05870 (ruvB)
DNA repair and recombination proteins [BR:pga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PGA1_c05870 (ruvB)
    RecFOR pathway proteins
     PGA1_c05870 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 AAA_22 Mg_chelatase AAA_3 AAA_14 RNA_helicase Rad17 AAA_2 TsaE AAA_17 AAA_33 nSTAND3 NTPase_1 AAA_18 NB-ARC NACHT AAA_28 ABC_tran AAA_11 Parvo_NS1
Other DBs
NCBI-ProteinID: AFO90317
UniProt: A0AA85Z8Y7
Position
600592..601641
AA seq 349 aa
MRESGTMIDADPTLRPTPLPEDSAAENDRALRPQGLGEFIGQAEARANLRVFIESARRRG
EAMDHTLFHGPPGLGKTTLAQIVARELGVNFRMTSGPVLAKAGDLAAILTNLESRDVLFI
DEIHRLNPAVEEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATTRMGLLTTPLR
DRFGIPTRLQFYTVDELFEIVSRNARKLGAPADDDGAREIARRARGTPRIAGRLLRRVVD
FAVVEGDGTITRELADGALTRLGVDQLGLDGADRRYLRMVAENYGGGPVGIETMSAALSE
SRDALEEVIEPYLLQQGLIQRTPRGRMLAHKAWTHLGLTPPRGQGDLLL
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgcgagaaagcggtaccatgattgacgccgatcccaccctgcgccccacgcctctgccc
gaagacagcgccgccgaaaacgaccgtgccctgcgcccgcaggggctgggcgaattcatc
ggtcaggccgaggcccgcgccaatctgcgtgtgttcatcgagagcgcccgccgtcggggc
gaggcgatggaccacacgctgtttcatggtccccccggtttgggcaaaaccacgctggcg
cagatcgtcgcccgcgaactgggcgtgaactttcgcatgacctccgggccagttctggcc
aaggccggcgatctggcggcgatcctcaccaatctggaatcccgcgacgtgctgttcatc
gacgaaattcaccggctgaacccggcggtggaggaggtgctatacccggcgatggaggat
ttcgagttggatctggtgatcggcgaaggccctgccgcgcgtactgtgcggatcgaactc
cagcccttcacccttgttggtgccaccacccgcatgggtctgctgacgacaccgctgcgc
gaccggtttggcatcccgacgcgattgcaattctataccgtggatgagctgttcgagatc
gtcagccgcaacgcccgcaaactgggggctcccgccgatgacgacggcgcccgcgagatc
gcgcggcgcgcccgcggcaccccaaggatcgccggacggctcttgcgccgcgtggtggac
ttcgcggtggtcgagggcgatggcaccatcacccgggagctggccgatggtgcgttgacg
cggctaggggtggatcagttggggctggacggcgccgaccggcgctatctgcggatggtg
gcagagaactatggcggcggacccgtggggatcgaaaccatgtcagcggcactgagcgaa
agccgcgacgcgctggaggaggtgattgaaccttacctgctgcaacaggggctgatccag
cgcacgccgcgcggccgaatgctggcacataaagcctggacccaccttggactgacgccg
ccacgcggtcagggcgacctgttgctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (52)   

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