KEGG   Photobacterium gaetbulicola: H744_1c1650
Entry
H744_1c1650       CDS       T03698                                 
Name
(GenBank) putative exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pgb  Photobacterium gaetbulicola
Pathway
pgb03030  DNA replication
pgb03430  Mismatch repair
pgb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pgb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H744_1c1650
   03430 Mismatch repair
    H744_1c1650
   03440 Homologous recombination
    H744_1c1650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgb03032]
    H744_1c1650
   03400 DNA repair and recombination proteins [BR:pgb03400]
    H744_1c1650
Enzymes [BR:pgb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H744_1c1650
DNA replication proteins [BR:pgb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     H744_1c1650
DNA repair and recombination proteins [BR:pgb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     H744_1c1650
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: AJR06668
UniProt: A0A0C5WHQ0
Position
1:complement(1917505..1918251)
AA seq 248 aa
MKRVLSYFKPLNRLSRGQAKWRDTYATRASAERVVNLLGPGLPAPDSTLLDLDILCLDFE
TTGLNPGKDQILSIGYVEMQKGMLNLSSSEETFIKDSCGINAHTAIINQITPEMLTSGQA
LDEAMEALFERMAGKVVLVHGLSVEKSFLEHYVQQRVGIPLPPLLWLDTLLIEKMLVTNR
HMREEGDYRLSSIRQRYGLPEYPSHGALIDAVATGELLLALMTKCFGHSSPRLEEVYDLH
HYELTMSQ
NT seq 747 nt   +upstreamnt  +downstreamnt
atgaaacgtgtgctgtcgtatttcaagccgctgaaccgcctttccagggggcaggccaaa
tggcgtgatacttatgctacccgagccagtgccgagcgggttgtcaacttgctcggtccg
gggctgccggccccggacagcaccttgctggatctcgatattctctgcctcgactttgaa
accacgggcctgaaccccggcaaagatcagatcctgagtatcggctatgtcgagatgcaa
aaggggatgctcaacctcagcagcagtgaagaaacatttatcaaggacagctgcggcatc
aatgcccatacggccattatcaatcaaattaccccggaaatgctgacatctggccaagca
ctcgatgaggcgatggaagccttgtttgaaaggatggcgggcaaggtggtgctggtccat
ggcctgtcggtcgagaagtcgtttctcgagcactatgtgcaacaaagggttgggatcccg
ttgccgccactactgtggctcgataccttgctgattgaaaagatgctggtgaccaaccgc
cacatgcgcgaagaaggggattatcggctgtcctctatccgtcagcgctatggcctgccg
gagtacccgagccacggggcgctgatagatgcagttgcaacgggggagttgttgttggca
ttgatgaccaagtgcttcggtcatagttcaccaaggctggaggaggtgtatgacctgcac
cactatgagctgacgatgagtcagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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