KEGG   Photobacterium gaetbulicola: H744_2c0749
Entry
H744_2c0749       CDS       T03698                                 
Name
(GenBank) putative 2',5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
pgb  Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:pgb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pgb03016]
    H744_2c0749
Enzymes [BR:pgb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     H744_2c0749
Transfer RNA biogenesis [BR:pgb03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    H744_2c0749
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS Thioredoxin_16
Other DBs
NCBI-ProteinID: AJR07480
UniProt: A0A0C5WWJ9
Position
2:complement(790301..790855)
AA seq 184 aa
MIKEKKQRLFFALSPDHSSDAFHRLARLSSQCCRLGRPVSQENLHITLAFLGMVTDEQTN
SIVAAAQQLTAPPAFSLRLTTLGYWKRSKVIWLAPEQPPLPLLALAQQLKSLVESCGLEQ
ESRPFKPHITLAKSVAKRPERLPAFDKIDFHFKHFGLYISKPVSHGCRQGVQYQLLSQWP
LGSR
NT seq 555 nt   +upstreamnt  +downstreamnt
atgatcaaagagaaaaaacagcgtttgttctttgcgttatcgcccgaccacagcagcgat
gcctttcaccgccttgcccggctctcatcgcaatgctgccggctcggccgccccgtgagc
caggaaaacctgcacatcaccctggccttcctcggcatggtcactgacgagcagaccaat
agcattgtcgccgccgcccagcagctaacggctcccccggccttttcattgcggctgaca
acactcggatactggaagcgcagcaaggtcatatggctcgcccccgagcagccccccctg
cctttactggcactggcgcaacagcttaaatccctcgtggaaagttgcggcctagaacag
gaatctcgcccgttcaagcctcatatcacccttgccaagtccgttgccaagcgcccggag
cgactaccggcattcgacaaaatagattttcacttcaaacactttggcctgtatatttcc
aaaccagtcagccatggctgccgccagggggtccagtaccagctcctcagccaatggccc
ctcggcagccgctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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