KEGG   Photobacterium gaetbulicola: H744_2c1279
Entry
H744_2c1279       CDS       T03698                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pgb  Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:pgb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pgb03016]
    H744_2c1279
Enzymes [BR:pgb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     H744_2c1279
Transfer RNA biogenesis [BR:pgb03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    H744_2c1279
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: AJR07958
UniProt: A0A0C5WLB2
Position
2:1343462..1344574
AA seq 370 aa
MITSRTRLEIICLQARRQSAVMLDTEFVRTRTLYPKLGLIQLFDGESLALIDPLAIDDLE
PLWELLRDQSVIKVLHACGEDLEVFQYYAGCLPVPMIDTQVMASFLGYGVSAGFGTLVKD
YLGIELDKGEARTNWLARPLTERQLDYAAADVYYLLPLYQKLMPLVEAKGWQEALAQECA
GLMLKRVKTIDPDKAYLDIKNAWQLNPKQLAILQKAAKWRVLEARKRDLALNFIVKELHL
WKLARYGIKSKAVMAKEGFDNMEIQRHANRLLKMVHDVDDMPEDRYPEKITRLVDLPGYK
QKVKHIKDVVSAVEQETGLMSEFLASKKQINQLISWAWKKDSPSDSLPDMLKTWRKPLFE
SKVLPLLQSK
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgatcaccagccgcacgcggttggaaataatatgcctgcaggcgcgccgtcagtcggcc
gtcatgttggataccgagtttgtcagaacccggaccctctacccgaaactgggtttgatc
cagctgtttgacggtgagtccctggcgttgattgacccattggcaattgatgatttggag
ccgctgtgggagctgctgcgtgaccagtcggtgatcaaggtgctgcacgcctgtggtgaa
gacttggaagtattccagtactacgcaggctgcttgccggtaccgatgattgatacccag
gtcatggcttcgttcctcggctatggggtgtctgcaggcttcgggaccttggtgaaagac
tacttgggtattgagcttgataagggggaggcgcgtaccaactggttagcccgtccattg
accgagcgtcagctcgattacgccgcagccgatgtttactatctgctgccgctgtaccag
aaactgatgccgctagtcgaggctaaaggttggcaggaagcattggcgcaggagtgtgcg
ggtctgatgctcaagcgtgttaagactatcgatccggacaaagcttacctcgacatcaag
aatgcgtggcagcttaatcccaagcagctggctattttgcaaaaggcggccaagtggcgg
gtactggaagcgcgtaagcgcgatttggccctgaactttatcgtcaaagagctgcacctg
tggaagttggcccgttacggaattaagtcgaaggcggtgatggcaaaagaaggtttcgat
aacatggaaattcagcgtcatgccaaccggctgctgaaaatggtccatgatgtagatgat
atgcctgaagaccgatacccggaaaaaatcactagactggtggatttgccgggatataag
cagaaagtgaagcatatcaaggatgtggtatcggcagttgagcaggaaaccggtttgatg
tccgaatttttggcgtcgaagaaacagattaaccagctgatctcttgggcctggaaaaaa
gactcgccgtccgacagtctgccagacatgctaaagacctggcgtaaaccgctgtttgaa
agcaaagtgctacctttgctgcagtcgaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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