KEGG   Photobacterium gaetbulicola: H744_2c3103
Entry
H744_2c3103       CDS       T03698                                 
Name
(GenBank) putative exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pgb  Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:pgb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgb03400]
    H744_2c3103
DNA repair and recombination proteins [BR:pgb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     H744_2c3103
    Archaeal homologous recombinant proteins
     H744_2c3103
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_21 ABC_tran DUF6824 MeaB DUF87 AAA_22 nSTAND3
Other DBs
NCBI-ProteinID: AJR09754
UniProt: A0A0C5WXP3
Position
2:complement(3486310..3490095)
AA seq 1261 aa
MKILALRGENLASLQQPFEIDFAGGRLGDAGLFAITGKTGAGKSTLLDAICLALYDRIPR
LQSNKKNDAEIGRDGDNGRIKANDVRSILSRGKAEGYAEVDFVANDGSHWRAHWHVRRAR
GRADGRIQASEQWLESLETGQRFAGKKAELQAEVERLVGLSFEQFRRAVMLPQGEFAAFL
KAGADERAALLERMTGGEIYGRLSMAAYERARDEKQKLDALQAQLGDIELLDDEQKAQLT
GQLAVLKQQLEQWEQSINALAQHHQALQVQARLHLQQQEAEQALVKAEEQLKEAAPRQEQ
LKQIAKVQPARSDFSLLQQTQLQLSKLQASLARATEELAQHKQGLLGADRRVQSTKQALA
TAKQHWDDLAPKLKQVALLDEQLAAGQRQLAELDTDHQQQLKLFNEHQQATEQKKRQRQQ
LQQRHHQLAMVLEQNRELAGVAEQYQPVLDNLDQYLSAHRTLATLSREKQQLQFEQQSHD
RNAAMLEAQQKEVAGQLDAVNKVLEELKVEQQEQAIADSQKQFASKQAELDVLRQAMSGT
KEWSTLLEQVEKLKAEHQELNQLKQQTEARLEALVPDMDQLFARYQEAEQQLQQSMAVVN
LNEYRSHLKPDSPCPLCGSLEHPYAEQHPVVEGLLHSQQQRLRELQQQLQNGEGERRHLQ
QQLPQCQQRLAVIDNELARYRAYSDQIVNQLLAMLEQAELSTSLTAEAGSDHLHNQLVQW
QQQAEQAYAEIRALQQGMETAQQQLQQGRQLQFQRQQLQQAEAEIKEHVHQQSQAETQRT
ERLQSIEQQSQTQQDILSSRGEALNEQYGNDQWLDMLRQHGAEQYIQQLKQQVEQYLSSH
KAQQEVERELHELAPQLAELEASMAASYKQALEKQQKAEQLQQQVQSLWQQRVGLFGEQA
ADAIEQQAQMALSEAQQQHEQAEQAQRQAGETMAAATAALAGLQQQEKELSAEHRQIVHN
WLGWQDKLALNEHQLMQLLSKDEAWQSQEQAALKALDDARTEAATRVQERAAAIAQHQAA
AEQAEQWFAGHQIDPAALSVDEDPVRQLREQWSAEKQSCDEQIFQLRQRLAMAEQALQQA
GELTEKMAAQQKQTELWLQMSELIGSATGNKFRTLAQGLTLQQLVMLANQHLHDLAPRYA
LQPVPNSPLALQVVDHDMGDEVRSVESLSGGESFLVSLALALALASLAADTRQLGSLFID
EGFGTLDPDSLEMALACLDALQADGRQIGVISHVGTLVERIGVQVAVEAQGGGRSQIKVR
G
NT seq 3786 nt   +upstreamnt  +downstreamnt
atgaaaatcttagcgctacgtggtgaaaacttggccagcctacagcagccatttgagatt
gattttgccggcggccgcctgggcgacgcgggcttgtttgccattaccggcaaaaccggg
gccggtaaatcgaccttgcttgatgcgatctgccttgctttgtatgaccgcatcccccgt
ttgcagtcgaacaagaaaaatgacgcggaaatcggccgcgatggcgacaatggccggatc
aaggccaacgatgtccgcagtatcttgtcccgcggcaaagccgaaggttatgccgaggtt
gattttgtggccaatgacggcagtcattggcgggcccactggcatgtccgccgggcgcgc
ggccgggccgatggccgtatccaagcctcggagcagtggctggaaagcctcgagaccggc
cagcgctttgctggtaagaaagccgagttgcaggcggaagtcgaacgtttggtcggtctg
tcttttgagcagttccgccgggcggtgatgctgccccagggcgagtttgccgcattcctc
aaagcgggggcggatgagcgcgcggccttgctggagcgaatgaccggcggtgagatctac
ggccgactgtcgatggcggcttacgagcgggcacgggacgaaaagcagaaactcgacgcc
ctgcaggcccagcttggtgatattgagctgcttgatgatgagcaaaaagcgcaattgacc
gggcagttggcggtgctcaagcagcagctggagcagtgggagcagtcaatcaatgcgttg
gcccagcatcaccaggcgctgcaagtccaagcaagactgcatctgcagcagcaggaagcc
gagcaggcgttggttaaagccgaggagcaacttaaagaggccgctcctcgtcaggagcag
ctgaaacaaattgccaaagtccaacctgcccgcagtgacttctccctgttgcagcaaacc
cagctgcagctgagcaagttgcaggcatcgctcgccagggcgacagaggagctggctcag
cacaagcaaggcttgttaggggcggaccgccgcgtacagagcaccaaacaggcactggcg
acagccaagcagcactgggatgatttggcgccgaaactcaagcaggtcgcgttgctcgat
gagcagctagcggccgggcagcgtcagctggccgagctggataccgatcaccaacagcag
ctcaagctgtttaatgaacatcagcaggccacagagcagaagaaacgccagcgccagcag
ttgcagcaacgccatcaccagttggcgatggtgcttgagcaaaaccgcgagctggccggc
gttgctgagcagtatcagccggtactggacaacctggatcagtacttgtccgctcaccgg
acactggcgacattgtcgcgagaaaagcagcaactgcagttcgagcagcaatcccatgac
cgcaatgcggctatgctggaggcccagcaaaaagaagtggcaggccaacttgacgcggtc
aacaaggtgctggaggagctcaaggtcgagcagcaagagcaggcgattgccgatagtcag
aaacaatttgccagcaaacaggccgaactcgatgtcctgcgtcaggcgatgtcggggacc
aaagagtggtcgactctgctcgagcaggtggaaaaactcaaggccgagcatcaagagctg
aaccagctcaagcagcagaccgaagcccgcctcgaggcgctggtaccggacatggatcag
ctctttgcccgttatcaagaggctgagcagcaactgcagcaaagcatggcggtggtgaac
ctgaatgagtaccgcagccatttgaagccagactctccttgcccattgtgcggctctctc
gaacacccttatgccgagcagcatcctgttgtggaaggcttgctgcacagccagcagcag
cgcttgcgtgagttgcagcagcaactgcaaaacggcgagggtgagcgccgccacttacag
cagcagttgccgcaatgccagcaacggctggcagtgattgataatgagctggctcgttac
cgggcctacagcgatcagattgtcaaccagttgctggcgatgcttgagcaggccgagttg
tcgacctcgcttaccgccgaggctggcagtgaccacctccataaccagctggttcaatgg
caacagcaggcggagcaggcatatgccgagatccgggccttgcagcagggaatggaaact
gcccagcagcagctgcagcagggacgtcagttgcagttccagcgtcagcagctgcaacag
gcggaagccgaaattaaagaacatgtgcaccagcagtcgcaggcggaaactcagcgcacc
gaacggctgcagtcgattgagcagcagagccagacccagcaggatatcctgtcttcgcgt
ggcgaagccctgaatgagcaatacggtaacgatcagtggcttgatatgctgcgccagcac
ggtgccgaacagtatatccagcagctcaagcagcaggtggagcagtacctgtctagccat
aaggcgcagcaagaggtggagcgagagctgcatgagctggccccgcagcttgccgagctg
gaagcgagtatggcggcgagctacaaacaggcactcgaaaagcagcaaaaagccgagcag
ttgcagcagcaggttcagtctttatggcagcagcgtgtcggcttgttcggcgaacaggca
gccgatgcgattgagcagcaagcacaaatggccttgtctgaagctcagcaacagcatgag
caagccgagcaggcacagcgccaggctggggaaaccatggcggcagcgacggctgccctg
gcaggcctgcagcagcaagaaaaggagctgtcggcggagcatcgccagattgtccataac
tggctgggctggcaggacaagttggcgctcaatgagcatcagctgatgcagttgctcagt
aaggacgaagcctggcagtcccaagagcaggcggcactcaaggcccttgatgatgcccgt
accgaggcagccacccgggtgcaggagcgtgctgctgcgattgcccagcaccaagcggcg
gctgagcaggccgagcagtggtttgccggtcaccaaatcgatccggcagcgttatctgtc
gatgaggatcctgtgcgccagctgcgcgagcagtggagcgcggaaaaacagtcttgcgat
gaacagatcttccagttacgccagcgcttggcgatggccgaacaagccttgcagcaggct
ggtgagctgaccgaaaaaatggccgcgcagcaaaagcaaaccgagctgtggctgcaaatg
agcgagctgattgggtcggcaacgggcaacaagttccgtacattggcccagggcttgacc
ctgcagcagctggtgatgctggccaatcagcacttgcacgatctggcgccacgctacgcc
ttgcagcccgtgccgaacagtccgttggccttgcaggtcgtcgaccatgacatgggcgat
gaagtgcgcagtgtcgagtcgttatccggtggtgaaagcttcctggtgtcgctggcattg
gcgttggcgctggcctctctggctgccgatacccgtcagctcgggtcgctgttcatcgat
gaggggtttggcacgcttgatcccgacagcctggaaatggcgttggcctgccttgatgcc
ttgcaggccgatggccgacagatcggggtaatttcccatgtcggtaccttggtggaaagg
atcggtgtacaggttgccgtcgaggcacagggaggcggccggagccagatcaaggtaagg
ggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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