KEGG   Pseudomyrmex gracilis (graceful twig ant): 109855547
Entry
109855547         CDS       T05003                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03082  ATP-dependent chromatin remodeling
pgc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109855547
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109855547
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pgc01009]
    109855547
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgc03021]
    109855547
   03036 Chromosome and associated proteins [BR:pgc03036]
    109855547
Protein phosphatases and associated proteins [BR:pgc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109855547
Transcription machinery [BR:pgc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     109855547
    SWI/SNF complex
     109855547
Chromosome and associated proteins [BR:pgc03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    109855547
   PBAF complex
    109855547
   SWI/SNF complex
    109855547
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 109855547
NCBI-ProteinID: XP_020285522
Position
Unknown
AA seq 369 aa
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRSITNDERKKLV
ELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPAPREGKTKKSMAWVPSL
PNSSHLDAVPQATPINRNRVHNKKVRTFPLCFDDTDPSANLENAAQQEMLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQIEAFPQETILED
QCDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAELGLGGEFVTAIAYSVR
GQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcgttgcgtacctacggagacaagccgataagttttcaagtcgaagagaatggagaa
tattattgcatcggatcggaagtcggcaattacctgcgtctatttcgcgggtcattgtat
aagagatatcctggcatgtttagaagatctataaccaatgacgaacgtaaaaagttagtg
gaactaggattgagtcagcatgttcttgcgtccagtgtatcacttttacgagcaagcgag
gtagaggatatcatcgagggcaatgatgacaaatacaaagcggtatctgtgcattcaact
gaaccacctgcgccaagagaaggtaaaaccaaaaagtcgatggcgtgggtacccagtcta
ccaaacagttcacacctcgatgcagttcctcaagccactccaataaatcgcaacagagta
cacaataaaaaagttagaacgtttcctttatgttttgatgataccgatccgtcagcaaat
ttagaaaatgctgcgcaacaagaaatgttagttccaattcgtttagatatggaaattgag
ggccaaaaattgagggatactttcacgtggaataaaaatgaaagtcttataacaccggag
cagtttgcggaagtattgtgcgacgatttagatttaaatccattaacatttgttccggcg
atcgcgcaagcgataagacagcaaatagaagcgtttcctcaagaaacaattttggaagat
caatgcgatcaacgagtgataattaaattaaacatacacgtagggaatacatctttagta
gatcaagtagagtgggatatgtcggaaaaagagaacaatcctgagaagtttgcaatgaaa
ctttgtgccgagcttggccttggtggtgaatttgtcaccgctatcgcttacagtgtacgc
ggacaattgtcgtggcatcagagaacgtatgcgttttccgaagcgcctttaccgacagta
gaagttcctttccgacctccatcggaggccgatcagtgggcgccatttttagaaacttta
acggatgcagaaatggaaaagaagatacgcgatcaagatcgaaatactcgacgtatgcga
cggttagcgaacacgacgcctgggtggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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