KEGG   Pseudomyrmex gracilis (graceful twig ant): 109856985
Entry
109856985         CDS       T05003                                 
Name
(RefSeq) transportin-1
  KO
K18752  transportin-1
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109856985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109856985
   03009 Ribosome biogenesis [BR:pgc03009]
    109856985
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109856985
Ribosome biogenesis [BR:pgc03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    109856985
  Pre-60S particles
    109856985
SSDB
Motif
Pfam: HEAT_EZ HEAT Arm HEAT_2 Vac14_Fab1_bd Cnd1 IBN_N MMS19_C Adaptin_N PDS5 CEP104-like_TOG Dopey_N SCD RTP1_C1 UNC45-central IFRD Urb2
Other DBs
NCBI-GeneID: 109856985
NCBI-ProteinID: XP_020288376
Position
Unknown
AA seq 906 aa
MKMAWQPQEEGLRQILTLLKESQSPDTATQRAVQQKLEELNKFPDFNNYLIFVLTKLTSE
DEPTRSLSGLILKNNVKTHFHKFLPEVINFIKQECLSAVGDPSPLIRATVGILITTVASK
GDLTTWPELLPALCQMLDSQDYNVCEGAFGALQKICEDSAETLDSDALNRPLNILIPKFL
HFFRHSSPKIRSHAIACVNQFIIQRTQALMIHIDSFLENLFHLASDEDSEVRKNVCRALV
MLLEVRMDRLIPHMHNIIEYMLMRTQDADEGVALEACEFWLSLAEQPICKEALAPHLTRL
VPILVRGMKYSEIDIILLKGDVEEDEMIPDREEDIRPRFHKSKTHHSHHANGMGRQHTDD
VNVSINNGCDDEDIDVEDGSDDDSTLSDWNLRKCSAAALDVLANVFREDLLPVLVPILKE
TLFHPSWEIKESGILALGAIAEGCMSGMIPHLSELIPYLIGCLSDKKALVRAITCWTLSR
YAHWVCAQPHETHLKPLMTELLKRVLDSNKRVQEAACSAFATLEEEACTELVPYLGFILE
TLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNRPDYINLLMPPLINKWNVLKDEDKDLF
PLLECLSSVATALRSGFLPYCEPVYRRCVSLVEQTLNQHIASTQSPEQFEAPDKDFMIVA
LDLLSGLAEGLDGHMERLVMNSNVMQLLYQCMQDSMPEVRQSSFALLGDLTKACFQHVLP
CIPEFMPILGQNLHPQFISVCNNATWAIGEISIKLGPDTSAYIPLILTQLIEIINRPDTP
KTLLENTAITIGRLGYVCPHDVAPMLQQFVRQWCTSLRSIRDNEEKDSAFRGMCQMITVN
PAGVVPDFIFFCDAVASWSAPKEDLKEMFQKILFTFKNQVGEENWKRFSDQFPPQLSERL
HNMYGV
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgaaaatggcttggcaacctcaggaagaaggactgagacaaattttgacgctgctcaag
gagtcgcagagcccggacacggcgacccagcgtgccgtacaacaaaaattggaagagtta
aacaaatttccagattttaataactacttgatatttgttttgacaaaacttacatcagaa
gatgaacctaccaggtctctgagtggactgatacttaagaacaatgtaaaaactcatttc
cataagtttttaccagaagttataaatttcataaaacaagaatgtctatcggcagttgga
gatccgtctccgctgattcgtgcaaccgttggtattttaatcactaccgttgcatcaaaa
ggtgacttaacaacttggccagagttattgccagcattatgtcaaatgttagattcgcaa
gattacaacgtgtgcgaaggcgcgtttggcgcgttacagaagatttgtgaagattcagcg
gaaacattggactcagatgctctaaatcgtcctctgaatattctgatacctaaattcctt
cacttttttagacactcaagtcccaaaatcagatcccatgcgatagcgtgtgtcaaccaa
tttattattcaacgcacgcaagctcttatgatacacatagacagttttctggaaaatctc
ttccatctagcttcagatgaagattctgaagttagaaaaaatgtatgcagggctttggtt
atgctgttagaagtacgaatggatagattaataccacatatgcacaatataatagaatat
atgttaatgagaactcaagatgctgacgagggagtagcattggaagcgtgtgaattttgg
ttgtcacttgcagagcaaccgatttgtaaagaagcacttgcaccacatctgacacgatta
gtacctattttagtaagaggtatgaagtattccgaaattgacataatccttcttaaagga
gatgtagaagaagatgaaatgataccggatagagaagaggatatccgaccacgttttcat
aaatcaaagacacatcactctcatcacgctaacggcatgggtagacaacacacagacgac
gtaaacgtcagtataaacaatggatgtgatgatgaagacatagatgttgaggatggatct
gatgacgattcaactttgagcgattggaacttgaggaagtgctcagctgcagcgttagat
gtgttagctaacgttttcagagaagatcttcttcctgttttggtacctatcttaaaagaa
actctttttcacccttcttgggaaattaaagagtccggtatcttagcattgggagctatc
gctgaaggttgtatgagcggtatgattcctcatctatctgagttgataccttacttgatt
ggctgtctaagtgataaaaaggctctcgttcgagccataacttgctggacgctaagtcgt
tatgcacattgggtttgtgcacaaccacatgaaactcatttaaaacctcttatgacagag
ttgctcaaaagagtgcttgacagtaataaacgtgttcaagaagctgcgtgctccgctttt
gcgactttagaagaagaagcctgcaccgagctggttccatatcttggattcattcttgaa
acacttgtttttgctttcggtaaatatcagcataaaaatcttctgatattgtacgatgca
atcggcactctcgctgattctgtaggacatcacttgaaccgaccagattacattaatctc
cttatgccacctcttattaacaagtggaatgttttaaaggatgaagacaaggatctattt
cctttgttagaatgtttatcttcggtagcgactgcattgcgttctggtttcttaccatat
tgcgaaccagtttataggcggtgtgtgtcgcttgtcgaacagacactgaatcaacatata
gcaagcactcaaagcccggaacaattcgaggcgcctgataaagatttcatgatagtagca
ttggatcttcttagtggattagctgaaggactggatggtcacatggaacgtttagtaatg
aatagcaatgttatgcagctgttatatcagtgtatgcaagatagcatgcctgaagttcgc
cagagcagctttgctttattaggagacctcacgaaagcttgcttccaacatgtgctcccc
tgtatacccgagtttatgcctatacttggacaaaatttgcatccacaatttatatcagtg
tgtaacaatgcaacctgggcgatcggcgaaatttcgataaaacttggacctgatacaagt
gcatatattccattgattctgacacagcttatcgaaataattaaccgaccagacacacca
aaaacactgttagaaaatacagccataacgatcggtcgcctaggttatgtgtgtccccac
gacgtcgcccccatgttacagcagtttgtccgccagtggtgtacttcgttacgaagcata
agagataatgaagagaaagattctgccttcagaggcatgtgtcaaatgataactgtcaat
ccagccggtgttgttccggacttcatctttttctgcgatgctgtggcatcatggtcggcg
ccaaaagaagacttgaaagagatgtttcaaaaaatcttgttcactttcaaaaatcaagtg
ggtgaagaaaactggaagcgtttctctgatcaatttccaccgcagctcagtgagcggctc
cataatatgtacggtgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (28)   

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