KEGG   Pseudomyrmex gracilis (graceful twig ant): 109857120
Entry
109857120         CDS       T05003                                 
Name
(RefSeq) splicing factor U2af 38 kDa subunit-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109857120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pgc03041]
    109857120
Spliceosome [BR:pgc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109857120
 Complex B
    109857120
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_2
Other DBs
NCBI-GeneID: 109857120
NCBI-ProteinID: XP_020288719
Position
Unknown
AA seq 240 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK
SADGSHLVANVSDEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR
REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS
RELRRYLYSRKKSKGRSRSRSRSRGRDRRRRSRSRERRSRSRDRRKGRDEKSRDGRSGRY
NT seq 723 nt   +upstreamnt  +downstreamnt
atggcagagtatctggcatcgatctttgggactgaaaaggacaaagtgaattgctcgttt
tatttcaagataggcgcttgccgtcatggggatcgatgttcacgaatccacaacaagcca
acttttagtcagacatgtttgctgcagaatttatatgtaaatcctcagaattctgcaaaa
agcgctgatgggtcacatttggttgcgaatgtgtctgacgaagagatgcaagagcattat
gacaatttttttgaggatgtttttatcgagtgcgaggataagtatggagaaattgaagag
atgaatgtgtgcgacaatcttggggatcatctagttgggaacgtttacataaaatttcgc
agagaagaagatgcggaaagagcagtcaatgacttgaacaatcgttggtttggcggaaga
ccagtttatgctgaactgtcacccgttaccgattttcgtgaggcttgctgtcgtcaatat
gaaatgggtgaatgcacccgttctggattttgcaactttatgcacttgaaaccgatctct
cgtgaacttcgtcgatatttgtacagccggaagaagagcaagggtcgatcaagatcacgc
tcaagatcacgtggtcgtgatcgcagaaggaggtctagatctcgtgaaaggagatccaga
tctagggatcgtcgcaagggaagagacgaaaagagcagagatggtcgatctggtcgctat
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system